Vibrio sp. EJY3: VEJY3_13900
Help
Entry
VEJY3_13900 CDS
T01683
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
vej
Vibrio sp. EJY3
Pathway
vej03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VEJY3_13900 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vej03400
]
VEJY3_13900 (uvrA)
DNA repair and recombination proteins [BR:
vej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VEJY3_13900 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VEJY3_13900 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_23
nSTAND1
AAA_25
AAA_21
DnaJ_CXXCXGXG
BCA_ABC_TP_C
NACHT
Viral_helicase1
zf_C2H2_10
Motif
Other DBs
NCBI-ProteinID:
AEX23254
LinkDB
All DBs
Position
1:3102680..3105502
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC
PTHHSPLAAQTISQMVDKVLELPEGSKMMLLAPIVKERKGEHVKTLENLAAQGFIRARID
GETCDLSDPPTLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD
GEEIIFSANFACPKCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDDSLS
LAQGAIRGWDQKNYYYFQMLTSIADHYGFDLHAPFNSLPKKTQEIILKGSGRTEIEFKYI
NDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYISTKSCSSCGGTRLRLEARNV
FIADTTLPEIVELSIADALSFFQTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTV
LVVEHDEDAIRCADHVIDIGPGAGVHGGNVVAEGTMAEIIANPNSLTGQYLSGVKEIAVP
KERTPRNPKKTVELIGATGNNLKNVNLSVPVGLFSCITGVSGSGKSTLINDTFFKIAHTQ
LNGATTAHPSPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYK
GKTIDEVLEMTVEDAREFFEPVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLA
RELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADWV
IDLGPEGGQGGGEIIAQGTPEDVSLIEGSHTARFLSPMLK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatagaagttcgcggtgcccgaacccataaccttaaaaatatcaacctgact
atccctcgcgataaactgacagttattacaggattaagtggctccggtaaatcttccctc
gctttcgacaccttatatgcggaaggtcaacgacgttatgttgagtctctttcggcttat
gcgcgtcagtttttgtctcttatggaaaagcccgatgtcgatcatattgaaggcttatca
ccagctatttctatcgaacagaagtcgacttctcataacccacgctcaaccgtaggtacg
attaccgaagtctatgactacttgcgtctgctttacgcccgtgtcggtgaacctcgctgt
ccgactcaccactcgcctcttgctgctcaaaccatcagccaaatggtggataaagtattg
gaattgcctgaaggcagtaaaatgatgctactggcacccatcgttaaagagcgtaaaggc
gagcacgtaaagacgttagaaaacctagcagcacagggatttatccgtgctcgtattgac
ggtgaaacttgcgatctttccgatccaccaacacttgaattacacaaaaaacacacgatc
gaagtcgtcgtcgatcgttttaaagttcgtccggatctgcaacaacgtttagctgaatct
ttcgagaccacactggagttgtctggcggcattgctgttgtcgcgccaatggatggtgac
ggtgaagaaattatcttctctgcaaactttgcttgtcctaaatgtggctacagcatgcag
gaattagagcctcgcctgttttcattcaataaccctgcgggagcttgtggtacttgtgat
ggtttgggtgtgcagcaatattttgatccaagccgagtcattcaggatgattcattgagt
ctggcacaaggtgctatccgtggctgggatcaaaagaactattactacttccagatgctc
acctcaattgcggatcactatggctttgatcttcatgctccgtttaattctctgccgaag
aaaacgcaagagatcatattaaagggttctggccgtacagaaattgagtttaagtacatc
aatgatcgtggtgacattcgagttaaacgtcatccatttgaaggcattctgaacacactc
gagcgtcgttatcgagacacggagtccaactctgttcgtgaagaattagctaaatatatc
tcgactaaatcttgttcaagttgtggcggtacacgtctgcgtcttgaagcgcgtaatgtg
tttattgccgacaccacactcccagagattgtagaactgagcattgcggatgcgctgagc
ttcttccaaacgcttaaactggaaggtcagcgtgcacagattgctgaaaaggtcatgaaa
gaaattaatgaccgcctgcaatttttggtgaatgtggggctaaattacctcaacttatct
cgcagtgctgaaaccctgtctggcggtgaggcacagcgtattcgcttagcaagccaaatt
ggtgcgggcttagtcggggtaatgtatgtacttgatgagccatcgattggcctccaccag
cgagataatgaacgtctgctaaaaacactgactcacctgcgcgatctgggtaatactgtt
ttagttgtggaacatgatgaagatgccattcgctgtgcagaccatgtgatcgatattggt
cctggcgctggcgttcatggtggcaacgtcgtagcagaaggcacaatggcagagatcatc
gccaaccctaattcactaacgggtcagtatctgagtggtgtaaaagagattgccgtaccg
aaagagcgcacacctcgcaatcctaaaaaaaccgtcgagcttatcggggcaacgggtaat
aacctgaaaaacgttaacttgtcagtgccagttggtttgtttagctgtattactggcgtt
tctggttccggtaaatcaacgctgattaatgatactttcttcaagattgctcatacgcaa
ctcaatggtgccacgactgcacatccatcgccttataaatcgataaaaggtctggaacac
tttgataaagtcatcgacatcgatcaaagtccaattggtcgtacacctcgttctaaccct
gctacatacactggtatttttactccaattcgcgaattgtttgctggtacgcaagaatca
cgttcacgcggatacaagccaggacgctttagttttaacgttcgaggcggtcgttgtgag
gcatgtcagggcgatggtgtaatcaaagtagaaatgcacttcctgccggatgtctatgtt
ccttgtgatgtgtgtaagggcaagcgctacaaccgtgaaaccttagaagttcgctacaaa
ggcaaaacgattgatgaagtgttggagatgacggtagaagacgcgcgcgaattttttgaa
cccgtacctgtcattgcacgtaaactgcaaactttaatggatgtaggtctgtcttatatt
cgcctcggtcaagcggcaacaaccctgtccggtggtgaagcgcaacgtgtaaaattggcc
agagagctatcaaagcgcgatactggcaaaacgctctatattctggatgagccaacgaca
ggtctgcacttccatgacatccagcagttattatcggtactgcaccgtctgcgtgatcac
ggcaacacagtcgtggtcattgagcacaacctggacgtaatcaaaacggccgactgggtt
atcgacctcggccctgaagggggccaaggcggtggtgagatcattgctcaaggaacgcca
gaagatgtgtccttgatcgaaggttcacacacggctcgcttccttagtcctatgttgaaa
tag
DBGET
integrated database retrieval system
