Vibrio sp. EJY3: VEJY3_14120
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Entry
VEJY3_14120 CDS
T01683
Name
(GenBank) transcriptional regulator
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vej
Vibrio sp. EJY3
Pathway
vej02024
Quorum sensing
vej05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VEJY3_14120
05111 Biofilm formation - Vibrio cholerae
VEJY3_14120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vej03000
]
VEJY3_14120
Transcription factors [BR:
vej03000
]
Prokaryotic type
Helix-turn-helix
PadR family
VEJY3_14120
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AEX23298
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All DBs
Position
1:3163431..3163970
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AA seq
179 aa
AA seq
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MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAEKELVTCVLEPQ
EGKPDRKVYSITDAGRSALGEWFDQPTAHPTVRDEFSAKLMACAVQPSAPFREQLSELVE
ESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLLLRETWITWAEEVLTELEVIG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgtaatcttaactgtgcttagcacgcgcgatgcaaccggttacgat
atcacaaaagaattctcagctagcattggttacttctggaaagcgagccaccagcaagtt
taccgtgagctaaacaaaatggctgagaaagaactggttacttgcgtactagagcctcaa
gaaggcaaaccagaccgtaaagtgtactccatcacagatgctggacgtagcgcactaggt
gaatggtttgatcagccaactgcacacccaacagttcgtgacgagttctcagcgaagctg
atggcttgtgctgtgcaaccgtctgcacctttccgtgagcaactatctgaactggttgaa
gagtcacgcaaactggtttctcactacaaagaaatcgaagctgcatactacgcgacgccg
tctactctggataaacaagcacgtctggagcgcctgacactacgccgcaatcttctacta
cgcgaaacgtggatcacgtgggcagaagaagtgctaactgaacttgaagttatcggctaa
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