Vibrio sp. EJY3: VEJY3_14920
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Entry
VEJY3_14920 CDS
T01683
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
vej
Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vej03021
]
VEJY3_14920
Transcription machinery [BR:
vej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VEJY3_14920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
HTH_3
UCR_14kD
KORA
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AEX23455
LinkDB
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Position
1:complement(3351220..3352077)
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AA seq
285 aa
AA seq
DB search
MTKEAYPMALVTQDSLDSYIRSVNSYPMLTVDEERELAERLHYKGEIEAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPSEVREMESRLAAVDS
TFDMPTDEDDSSNNYTAPMLYLEDKSSDVADNVEAANWEMHTNNRLGHALASLDERSQRI
VRSRWLDDEKATLQDLADEFGVSAERIRQLEKNAMKKLKLAVGEF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagcgtatccgatggctctagtcacgcaagatagccttgatagctatatt
cgctccgttaacagctacccaatgctgacggtagatgaagagcgtgagctggcagaacga
ttacactacaaaggtgagattgaagcagcgaaagggctgatcctgtcgcacctgagattc
gttgttcacgttgctcgaggttactcaggctacggtttgccaatggcagacttagtgcaa
gagggcaatatcggcctaatgaaagcggttaagcgttttaacccagaagtgggtgtgcgt
ttggtgtcttttgcggtccactggattaaagctgagatccatgaatacgtgctacgtaac
tggcgtattgttaagatcgcaacgactaaagcacaacgtaaattgttctttaacctacgc
aagtcgaaaaagcgcttgggttggttcaataacggcgaagtagaaaccgttgctcgtgaa
ttaggtgttgagccttcagaagtccgtgagatggaatcccgtctggcggcggtcgactca
acgtttgatatgccaaccgacgaagacgacagctcaaacaactacacagcaccgatgctt
tatctagaagataaatcgtcagatgttgctgataacgttgaagcagcaaactgggaaatg
cataccaacaatcgtcttggacatgcattggcaagtttggatgagcgtagtcagcgtatt
gtgcgttctcgttggttagatgacgagaaagccacactgcaggatttggctgatgagttt
ggtgtatctgccgagcgtattcgtcagttagaaaagaatgcaatgaagaagctcaaactg
gccgttggtgagttctaa
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