Vibrio sp. EJY3: VEJY3_15050
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Entry
VEJY3_15050 CDS
T01683
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej00300
Lysine biosynthesis
vej00470
D-Amino acid metabolism
vej01100
Metabolic pathways
vej01110
Biosynthesis of secondary metabolites
vej01120
Microbial metabolism in diverse environments
vej01230
Biosynthesis of amino acids
Module
vej_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VEJY3_15050 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VEJY3_15050 (dapF)
Enzymes [BR:
vej01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VEJY3_15050 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Ig_CNNM4_N
Motif
Other DBs
NCBI-ProteinID:
AEX23481
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Position
1:complement(3373152..3373982)
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLTNKYSISVSTKKGKMILNVEDDGEVTVNM
GVPEFEPNKIPFKAKQKEKTYIMRAGDNTLFCGAVSMGNPHVVTVVDDVDTADVDTLGPL
LESHERFPERVNAGFMQVVDRSHIRLRVYERGAGETQACGSGACGAVAVGILQGLLDENV
KVSLPGGELNISWQGLGKPLFMTGPATHVFDGQLSC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccacttttccaaaatgcacggtttgggtaacgacttcatggtcgtcgactgc
attacccagaacgtgtttttctcgcaagatttgatccgccgcctggcggatcgacacact
ggtgttggctttgaccaattgctcgtggtagaagcgccgtatgacccagagaccgacttc
cactatcgcatatttaatgccgatggcagcgaagttgagcagtgcgggaacggtgcgcgt
tgttttgcgcgttttgttcgccttaaaggtttgaccaacaaatacagcattagcgtgagt
accaagaaagggaaaatgatccttaacgtcgaagacgatggcgaagtaacggtcaatatg
ggcgtgccagagtttgagccgaacaagatccctttcaaagcgaagcaaaaagagaaaacc
tacattatgcgcgctggtgacaacaccctgttttgtggtgctgttagtatgggcaaccct
catgttgtgacggtcgtggatgatgtcgatactgctgatgtcgatacattaggtccgctg
ctagagtctcacgagcgtttccctgagcgagtgaatgcaggctttatgcaggttgtcgat
cgcagccatatccgtctgcgtgtttatgagcgcggtgcgggcgaaactcaggcatgcggc
agtggcgcctgtggtgcggttgcagttggtattctacaaggcttgctcgatgaaaatgtc
aaagtgtcgctacctggtggtgaactgaatatttcttggcaaggtctgggtaagccgctg
tttatgacaggccctgctactcatgtctttgacgggcaactgtcgtgctag
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