Vibrio sp. EJY3: VEJY3_15055
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Entry
VEJY3_15055 CDS
T01683
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej00300
Lysine biosynthesis
vej00470
D-Amino acid metabolism
vej01100
Metabolic pathways
vej01110
Biosynthesis of secondary metabolites
vej01120
Microbial metabolism in diverse environments
vej01230
Biosynthesis of amino acids
Module
vej_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VEJY3_15055
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VEJY3_15055
Enzymes [BR:
vej01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VEJY3_15055
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AEX23482
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Position
1:complement(3373993..3375246)
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAEDVSLQALAEQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV
KANSNLGVLNTLARLGSGFDIVSGGELERVIAAGGDAKKVVFSGVGKTPAEMKRALELGI
KCFNVESEPELERLNKVAGDLGVVAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP
EVYKFAQSLPNLNVQGIDCHIGSQLTDIEPFIDATDRLLALIDDLKAQGINIRHLDVGGG
LGVVYRDELPPQPSDYAKALLGRLTNHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVSPRDGEAQTYDLVGPICETGDFLGKDRALVLQE
GDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGKQSHLVRQREELTSLWQLEQILPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaactatcaggatgatggccagctttgggccgaagacgtctcacttcaa
gctctggccgagcaatatggcactcctctttatgtatactctcgagccacgctagagcgc
cactggaaggcgtttgatagtgcagtgggtcaacatcctcatctggtttgttatgccgta
aaagcaaactcaaacttaggcgtactgaatacactggctcgtttgggctcaggctttgat
atcgtatctggtggtgaactagaacgtgttattgctgccggtggtgacgcgaagaaagtg
gtattttctggtgtaggtaaaaccccagcagaaatgaaacgcgcactggaacttggtatc
aagtgcttcaacgttgaatctgagcctgaacttgagcgcctgaataaagtggcaggcgat
cttggtgtggttgctcctatttcactgcgcatcaacccagatgtagacgcaaaaactcac
ccttatatttcgactggtcttcgcgacaacaaatttggtattgcgtttgatcgtgcacca
gaggtgtacaaattcgcccaaagcttgccgaacctaaacgtacagggtatcgactgtcat
attggttctcagttgactgatattgaaccttttatcgatgcgactgatcgcttgcttgct
ctgattgatgatctgaaagcgcaaggcatcaacattcgtcacttggatgttggtggtggt
cttggtgtggtttaccgtgatgagcttcctccacagccatcagattacgcgaaagcgctg
ttgggacgtctgactaatcaccaagatctggaactgatttttgaacctggtcgtgcgatt
gcagcgaatgctggcatcttgctgactcgcgttgagttcttaaagcacactgagcataaa
aactttgccattattgatgcagcaatgaacgacctgatgcgtcctgctctttaccaggca
tggcaagatatcgtgccagtttcgccccgcgatggtgaagcgcaaacttacgatttggtt
ggaccaatttgtgaaaccggtgatttcctgggtaaagatcgcgcgttggttttacaagaa
ggtgatctactcgcggttcgttctgctggcgcctatggttttgttatgtcttcgaattac
aatactcgtacccgagcggcggaagtgatggtggacggtaagcaaagccatcttgttcgt
cagcgtgaggagctgacaagtttgtggcagctggaacagattctaccggagtaa
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