Vibrio sp. EJY3: VEJY3_15916
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Entry
VEJY3_15916 CDS
T01683
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VEJY3_15916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vej03000
]
VEJY3_15916
03400 DNA repair and recombination proteins [BR:
vej03400
]
VEJY3_15916
Enzymes [BR:
vej01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VEJY3_15916
Transcription factors [BR:
vej03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VEJY3_15916
DNA repair and recombination proteins [BR:
vej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VEJY3_15916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AEX23604
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Position
2:25371..26738
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AA seq
455 aa
AA seq
DB search
MLIHPYTSLTFEQCQKARMSRDSRFDGRFYIGVKTTGIFCRPICPANLPKEENVEYFTDK
TQAIKAGYRPCLRCRPDSAPGSWAWRGVETTFQRAISMIDKGELHHHSVCELAERVGISD
RYLRMLFEQYLGMSPKQYAQYQQLMFAKQLLHSSSMSVTEVGFAAGFNSTRRFNDAFQKF
LKLTPSQVRRNEFETMETNRIVLPFRGEFNWQHMLDFYRLRAIEGVEVLTENSYSRTVCV
SGSKAWFKATKGESHLELDFEIEDVAKLQNLVTSVRRMFDLDADICTIERHLSYVAPGVV
KSSGIRIPGVWSTWEAGVRAILGQQVSVKAAIGQLNLLVDKLSAEGEVRYFPEPIDIVNA
DVSFLRMPQSRKNTLVTFAQYMLDNPQAEPQQWLKLKGIGPWTVSYAELRGESNPDCFLH
NDLVVKKAMQRFPSLNSHTASPWGSYATFHLWNQS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcttatacacccctacacgtcattgacgtttgagcagtgtcagaaagcgcgtatgtca
cgtgatagccgttttgatggtcgattttatattggtgttaaaacaaccggtattttctgc
cgaccaatatgtccagctaacttaccgaaagaagagaatgtcgaatattttacggacaaa
actcaggctattaaggcaggttatcgcccttgtttgcgctgccgaccggatagtgcgcct
ggttcgtgggcctggagaggcgtagaaaccacgtttcaacgcgctatctctatgattgat
aagggcgagttgcatcatcattcggtgtgtgaactagcagagcgtgtaggaatatctgat
cgttatttgagaatgttgttcgaacagtacctaggtatgtcgcccaagcaatatgctcaa
tatcagcaattgatgtttgctaaacagttactgcattcgagttcgatgtctgttaccgaa
gtgggctttgccgcaggttttaacagcacgcgccggtttaatgatgcttttcaaaagttt
ctcaaattgacaccgtctcaggttaggcgtaatgagtttgaaacaatggaaacgaatcgg
atcgtgttaccgtttcgcggcgaatttaattggcagcatatgttggacttttatcgttta
agggcgatcgaaggcgtggaagtgctgacggaaaacagttacagccgtacggtttgtgtc
tcaggaagcaaagcgtggtttaaagcgacgaaaggtgaaagccatctcgaactggacttc
gaaattgaagatgtcgccaaattacagaatttggtgaccagtgttcgccgaatgtttgat
cttgacgctgatatttgcacgatagagcggcatctcagttatgttgcccctggggttgta
aagagtagtggtattcggattcctggcgtgtggagtacatgggaagcgggcgttcgggca
attttaggccagcaagtttcggttaaagcggcgattggccagttgaatctgctggtagat
aaactcagtgcagaaggagaagtgcgttattttcctgagccaattgacatcgtgaatgcg
gacgtgagttttttacgcatgcctcagagtcgaaagaatacgttagtgacctttgcacaa
tatatgttggataatccacaagcggaaccacagcaatggttaaaacttaaaggtattggg
ccctggacggtgagttatgccgagcttcggggagagtctaaccctgactgttttttgcat
aacgacttagtcgtaaaaaaggcaatgcagcgcttcccgtctctcaatagccataccgcg
tcaccttggggaagttacgcaacttttcatttatggaatcaatcatga
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