Vibrio sp. EJY3: VEJY3_16811
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Entry
VEJY3_16811 CDS
T01683
Name
(GenBank) SoxR protein
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
vej
Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vej03000
]
VEJY3_16811
Transcription factors [BR:
vej03000
]
Prokaryotic type
Helix-turn-helix
MerR family
VEJY3_16811
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
HTH_17
WHD_1st_NFRKB
COG7
DUF1836
HEF_HK
Allexi_40kDa
DUF8331
TPR_MLP1_2
Ribosomal_L12
Rv1828_C
Syntaxin
VPS53_C
Med9
Motif
Other DBs
NCBI-ProteinID:
AEX23783
LinkDB
All DBs
Position
2:218684..219115
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AA seq
143 aa
AA seq
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MEISVGEVAKRSGVKVSALHFYEQKGLISSWRNQGNQRRYHRSVLRRVAVIKAAQQVGLS
LEEIKQALDNLPKHQAPNKAQWERMASQWHEQLEQKIQQLKALQNDLGGCIGCGCLSLET
CALRNPEDVLGKDHSGSNLTLDE
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcagcgtaggtgaagtagcgaaacgttctggagtgaaagtgtcggcactgcat
ttttatgaacaaaaaggattaatttcgagctggcgaaatcagggaaatcaacgtcgctat
catcgaagtgtgttacgccgtgttgccgtgattaaggctgcgcagcaggtaggcttgtct
ttagaagaaatcaaacaagcgctggataacctgccaaagcatcaagcaccgaacaaagcg
caatgggagagaatggcgagccaatggcatgagcagttagagcaaaaaattcagcagttg
aaagcactacagaatgatttgggtggttgtattggatgcggttgtctatcgcttgaaacg
tgcgccttacgtaacccagaagatgtgttaggaaaagatcattcaggctctaacctaacg
ttggatgagtga
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integrated database retrieval system