Vibrio sp. EJY3: VEJY3_19376
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Entry
VEJY3_19376 CDS
T01683
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vej
Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vej03400
]
VEJY3_19376
DNA repair and recombination proteins [BR:
vej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VEJY3_19376
Archaeal homologous recombinant proteins
VEJY3_19376
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Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AEX24294
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Position
2:797962..799095
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AA seq
377 aa
AA seq
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MKFIHTSDWHLGRQFHNVSLLDDQQAVLEQLISYIEDNPVDAVVVAGDVYDRSVPPTVAI
ELLNRVVKRICTDLKTPMILISGNHDGAERLGFGSEQMKNSGLHIISNFEDMLLPVVITT
KAAGEVALYGMPYNDPEQVRFAYKESVSTHDEAHKLLVEKITEQFQPQQRRVLISHCFVD
GAIESDSERPLSIGGSDRVSHEHFLDFDYVALGHLHQPQKKGEEYIRYSGSLMKYSFGEQ
NQKKGFTLVEINESGFASAEHIELIAPHEMRIIEGDLEQVIEKGKTDPKSEDYLLVRLMD
KHAILNPMEKLRAVYPNVLHLEKPGMLIGVEQEMAQAKLARSEIDMFRDFFSEAQDSQLS
QEQERAVNDIIKQLSQL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatccatacctcagattggcacctaggccgacagttccacaacgtttcatta
ctcgatgatcagcaagcggttctcgaacaattgatctcctacattgaagacaacccagtc
gacgcagtcgtcgtggcgggagatgtgtatgaccgctctgttccgcctacggttgccatc
gaacttttgaatcgtgtggtaaaacgaatttgtactgatctgaaaacaccgatgattttg
atttctggtaatcacgatggtgcagagcgtttggggtttggctctgaacagatgaaaaac
tcgggtttgcatatcatcagtaactttgaagatatgcttttgcctgttgtgattacgacc
aaagcggctggtgaggtggcactttacggcatgccttataacgatcctgagcaggtcagg
tttgcctataaagaatcggtttcgacccatgatgaagcgcacaaactgcttgttgaaaaa
attacggagcagtttcaaccgcagcaaagaagagtgcttatcagccactgtttcgtagat
ggggcgattgagtctgactcggaacgcccgctttctattggtggttctgatcgtgtaagc
catgagcacttcctggatttcgactatgtcgcacttggccatttacatcagccgcagaag
aagggtgaagaatacattcgttactctggctctttgatgaaatacagttttggtgaacag
aaccaaaagaaaggtttcacgctggtggaaatcaacgagagtggttttgcgtctgctgag
catattgagctgatcgccccgcatgagatgcgaattattgaaggtgatttagaacaggtc
atcgagaaaggaaaaacggacccgaaaagcgaggactatttactcgttcgtctgatggat
aaacatgccattttaaatccgatggaaaaacttcgtgcggtctacccaaatgttttgcac
ctagagaaacctggcatgttgatcggggttgaacaggagatggcacaagccaaacttgct
cgcagtgaaatcgatatgttccgcgacttctttagtgaagcgcaggacagtcagttgtcg
caagaacaagagcgagccgtcaacgatattatcaagcaattatctcagctgtaa
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