Vibrio sp. EJY3: VEJY3_20206
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Entry
VEJY3_20206 CDS
T01683
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej00260
Glycine, serine and threonine metabolism
vej00460
Cyanoamino acid metabolism
vej00630
Glyoxylate and dicarboxylate metabolism
vej00670
One carbon pool by folate
vej00680
Methane metabolism
vej01100
Metabolic pathways
vej01110
Biosynthesis of secondary metabolites
vej01120
Microbial metabolism in diverse environments
vej01200
Carbon metabolism
vej01230
Biosynthesis of amino acids
vej01240
Biosynthesis of cofactors
vej04981
Folate transport and metabolism
Module
vej_M00140
C1-unit interconversion, prokaryotes
vej_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VEJY3_20206
09102 Energy metabolism
00680 Methane metabolism
VEJY3_20206
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VEJY3_20206
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VEJY3_20206
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VEJY3_20206
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VEJY3_20206
Enzymes [BR:
vej01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VEJY3_20206
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEX24458
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Position
2:985551..986846
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AA seq
431 aa
AA seq
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MNKSYPNHSLENFFSTNLSATDDAVFAGIQAEFARQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFSCEYANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRETLEINYEDVRALALEHKPKM
IIAGGSAIPRTIDFAKFREIADEVEAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFKTYINSV
INNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DSEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWIGDVLDGLVESPEGNEEVEQRVRKEV
KALCGRFPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagttaccctaaccacagcttggaaaactttttctctaccaacctctctgcg
acagatgatgctgtctttgctggaattcaggcggaattcgctcgccaaaacgaacaaatc
gaacttatcgcttctgagaacattgtgtctaaagcggtaatgcaagctcaaggcacttgc
ctaacaaataaatacgctgaaggttaccctggccgtcgttactacggtggttgtgaacac
gttgatacggttgaggcaatcgctatcgaacgtgcgaaaaaactttttagttgcgaatac
gcaaacgttcaacctcactcaggtgctcaggcgaacggcgcagtaaaactggctcttctt
cagccaggcgacaccattttaggtatgtcattagacgcgggtggccaccttactcacggc
gcacgccctgctctctcaggtaaatggttcaatgccgttcagtacggtgttgaccgcgaa
acactagaaattaattacgaagatgttcgtgctcttgcgcttgagcacaaaccaaaaatg
atcattgctggtggcagtgctattccacgtactatcgacttcgctaagttccgcgaaatt
gcagacgaagttgaagctattctaatggttgatatggcgcacatcgcaggtcttatcgcg
actggtgctcacccaagcccactaccacacgcacacgttgtaacgacaacaacgcacaaa
acattgcgtggtccacgtggcggcatgatcttaaccaaccacgaagacattattaagaaa
atcaactcagcggtattccctggccttcaaggtggcccgctaatgcacgttattgctgca
aaagccgttgcatttggtgaagcgcttggccctgagttcaaaacttatatcaattcagtg
atcaataacgcaaaagtattagctgaagtattgcagactcgcggttgcgacattgtgact
ggcggaaccgatactcacctaatgctggttgaccttcgtcctaagggtttgaaaggtaac
aaagcagaagaagcgctcgagcgtgcgggaatcacatgtaataaaaatggcatcccattt
gactcagagaagcctatgattacatcgggtatccgtttgggtacaccagctggcacaagc
cgcggctttggcgcagaagaattcaagctcatcggtaattggattggcgatgtattggat
gggttagtagaaagccctgaaggtaacgaagaagtagaacagcgcgttcgcaaagaagtg
aaagcactgtgcggccgattccctctttaccaataa
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