Vollenhovia emeryi: 105556328
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Entry
105556328 CDS
T06016
Name
(RefSeq) LOW QUALITY PROTEIN: small RNA degrading nuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
vem
Vollenhovia emeryi
Pathway
vem03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105556328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vem03009
]
105556328
Ribosome biogenesis [BR:
vem03009
]
Eukaryotic type
Pre-60S particles
RNases
105556328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
GAD
NTF-like
Motif
Other DBs
NCBI-GeneID:
105556328
NCBI-ProteinID:
XP_011858798
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
IKKELTTKQLQGLEKKKAAFLEIARLNDKDKEAKLQALKQRIIKDRGNFIDLYIVLSDIN
QYASLKEELKRRKKRLKAIPRLTLKAVGEXATLDIRNVGKRIPIFLSDVQHLLLYSLLGH
SPYLPAARWCQLEKYNKVSHTVVLVLEGLSSHHYMAYESMFPHIVNNLKHRLEVITPAVY
GXITEELAAVPLTGTQSDKLIKRYGSLETALQTNGNVIKLLRSVFPMHSINSDEKLPTKD
SSDGDLPSTDKFSRTKLLLSLWQMVEENYPVPLRGPLVEREATSTSPMFGLDCEMCLITS
GNLELTRISIVDESMKVIYDSLVKPENAITNYLTRYSGITEDMLDDVTLHDVQQTLRTLL
PADAILVGQSLNSDLHTLKMMHPYIIDTSVIFNLTGDRYRKTKLQILAREFLGERIQDSK
AGHCSAEDSKASMKLVKLKLANSVDYGDAVLLGDRSMRVLKMETGNERTKRTLQSTEIKK
YATSIFSHITKNKGATTAIVGDDEVMSEYSKYLTNSSLNVMDDESFAKDDQVHLVIADND
KHAVDRTSEIVMEHAFVLCHVKLGEEQLKDELLEETFRTVNEWIYKHKIINMYIYIDLLF
IKYLFSPILVTAE
NT seq
1844 nt
NT seq
+upstream
nt +downstream
nt
tgataaagaaggagcttacgacaaaacaattacaaggattagaaaagaagaaggcagcat
ttttagaaattgcgaggctcaacgataaagataaggaagcaaaactgcaggctttaaagc
agaggataattaaagaccgagggaactttattgatctatacatagtattaagcgatataa
accaatatgcaagcttgaaggaagaactcaagagacgtaagaagaggcttaaagcaattc
caagactcactcttaaagcggttggcgagnatgctactctggatattcgaaacgtaggaa
agaggataccgatatttcttagtgatgtacaacatcttctgttatattcactgctcggcc
attcaccctatcttcctgcagcgagatggtgtcaacttgagaagtataacaaagtaagcc
atactgtagtcctggtgcttgaaggcttgtcttcacatcattacatggcttatgagagca
tgttcccacacatagtaaataacttaaagcatcgtttagaggtaataacacctgctgtct
atggangcataacagaagagctagcagctgttcctttaacaggaactcaaagtgataaat
taattaaacgatatggctccttagaaactgctctgcaaacaaacggaaatgttataaaat
tgctgagaagcgtctttccgatgcattcgataaatagtgacgagaaattgcctacgaagg
acagctccgacggagatttaccatcgactgataaattttctagaacgaaactgcttttgt
cgttatggcaaatggtggaggaaaactatcctgtacctctgagaggaccgttagtagaaa
gagaggccacgtcaacatcgccaatgttcggtttagattgtgaaatgtgcctgataacaa
gcggcaatttggaactcactagaataagtattgttgatgagagcatgaaggtcatttatg
acagtttggtgaaaccggagaatgcaataacaaattatctgactcggtacagcggcatta
ctgaggatatgttggacgacgtcacgttgcacgacgttcaacagacactgagaacgttac
ttcctgcggatgcgattctcgtaggacaaagcttgaattcagatttgcacacgttaaaaa
tgatgcatccctacatcatcgatacctccgtaatattcaatcttactggagataggtata
gaaaaacgaaactgcagattttggcacgtgaattcctcggggaacgcattcaagacagta
aagccggacactgctcggccgaggactcgaaggcttccatgaaattagtaaagttgaaat
tagcgaacagcgtggattacggagacgccgtgctgctcggcgatcgcagcatgagagtct
tgaaaatggaaactggcaacgagagaacgaagcgaacattgcaaagtacagaaataaaga
aatacgccacatcgatatttagtcacataacgaaaaataaaggtgccaccaccgccatcg
tgggcgacgatgaggtgatgtccgaatattccaaatatttaacgaactcgtctctcaatg
tcatggacgacgaaagtttcgcgaaggatgatcaagtacatctagttatagcagataacg
ataaacacgctgtagatcggacttcggaaatcgtgatggagcatgcttttgtactgtgcc
atgtgaaactcggggaagaacaactgaaagacgaactgctagaagaaacatttcgtactg
tgaatgaatggatttataaacataaaattataaacatgtatatttatattgacttgcttt
ttataaaatatcttttttcgccaattttagtaactgcggaatag
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