Vollenhovia emeryi: 105557655
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Entry
105557655 CDS
T06016
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vem03000
]
105557655
04121 Ubiquitin system [BR:
vem04121
]
105557655
Transcription factors [BR:
vem03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
105557655
Ubiquitin system [BR:
vem04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
105557655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
hAT-like_RNase-H
ATPase_2
Motif
Other DBs
NCBI-GeneID:
105557655
NCBI-ProteinID:
XP_011860347
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MRFVRQPLTIRVMNYDDRLRSMGGDNAEKRKHGTMLPNTIRAIICGPSNCGKTNVLISLL
ESPHGVCFENVYVYSKSLQQPKYQYLEKLLTSIDEIDYFTFSNNSDVIPPMVPAFKKGSP
VWHFFIKNSTGGTCKICSTDVKSGGSGGNTTNLKNHLVRKHPGNPDIKQMFIKDAKLTAE
NAETVNMQRTNKLVNSTDDNQTACSTSRTPTSISSMPAMPSSALILSIPSPASTVMELDS
MTSRSNVSSPTASMNSIESELSGRLSSNKTSRLQPRIDNTFKQMKSFEGGSKAGEITNAI
LFMLAKDNMPFNTVKKEGFKYLIKTTVPLYNVPGRKSITKYMEEKYNYLSSVTKDRLNTT
QHISLTSDLWTDVLNTVSYLEMTAHYAFEDELRSTTIGVTEVTERHTAEVLGRWIENIMD
DWNIDKDNVVVMVTDNGSNIVKAVHDTLGSNKHLPCFAHTLNLVATHTMDFDDATVLVTK
IKTIVTFFKQSSIAANELRKISALKLTQCVDTRWNSIYYMLERFIMLADTVGSILLKMPS
SPPMLTAAELLLAKEVLEVLRPIEQMTKELCGEKYVTISKMIPMIYCLKKEIESLCMRLQ
TLTARTLIDRLQKQIVKRFGHITNNRIIAVSTILDPRFNRLHFQQNERVACAQSVNFIAK
CMREIDRTNTSNDNAIITEPNVEKLETSNNLWMYHKDLVKGQIANDEERNQNEMPTNLRH
YLNQPLAQLEENPMFYWSKQYKMMYPTLSEVAKKYLPVVATSVPSERLFSRAGNILTEDR
NRLSPDHLQQLLFLNSLTAEEWQLKD
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcgtgcgacagccattaacgatacgcgttatgaattacgacgacagattacgg
tcgatgggaggggataacgctgagaaacgcaagcatggtacaatgctgccgaatactata
cgcgcaatcatttgcggcccctcgaattgtggtaaaaccaacgttttgataagcttactg
gaaagtccacacggtgtatgtttcgagaatgtgtacgtatactcgaagtcgttgcaacaa
ccgaaatatcagtacttggagaagctattgacgtctatcgatgaaatcgattactttaca
ttctctaataacagtgacgttattccaccgatggtacctgcatttaaaaaaggaagccct
gtatggcatttttttataaaaaattcaactggtggcacttgcaaaatttgctctactgac
gtaaaatctggtggatccggtggaaacactaccaatttaaaaaaccatttggtgcgaaag
catccaggcaatcctgatataaaacaaatgtttataaaagatgcgaaactgactgctgaa
aatgctgaaactgtcaacatgcaacggacaaataaattagtgaattctacagatgataat
caaactgcgtgctcaacctcaagaacgccgacgtcgatatcatcaatgcccgcaatgccg
tcgtcagcattgatattatcaataccgtcaccggcatcgacagtcatggaattagattcg
atgacctctaggtctaatgtttcttcaccaacagcttcaatgaattcaatagagtcagaa
ctgtctggaagattatcttcgaataaaacgtctcgtttgcagccaagaattgataacact
ttcaagcaaatgaaatcgtttgaaggaggatcaaaagctggggaaataaccaacgccata
cttttcatgctcgccaaagataatatgccctttaatactgtgaaaaaagaaggtttcaaa
taccttattaagactactgttcctttgtacaatgttcctggaagaaaatctattactaaa
tatatggaagaaaaatacaactacctatcatcagttacaaaagataggctaaataccacc
cagcatatttcgctcacatctgacctatggaccgatgtactcaacaccgtgagttattta
gaaatgacagcacattatgcgtttgaagacgaactgcgatccacaacgataggtgtaact
gaagtaacggaacgacacacagctgaggttttagggaggtggatagaaaatataatggat
gattggaacatcgataaagacaatgttgttgtaatggtgacagacaatggatcaaacatt
gtgaaggcagttcacgatacattgggatctaataaacatcttccgtgctttgctcacacg
ttaaatttggttgctacacacaccatggattttgatgatgcaacagttttggtgacgaag
ataaaaacaattgtaaccttttttaaacagtcctcaattgctgccaatgagttacggaaa
atcagcgccctcaagttaacacagtgtgttgatacgcgttggaattctatctactatatg
ttggaacgcttcattatgttggcagatacagttggatcaattttattgaaaatgccaagc
tcacctccaatgttgacggcagctgaactgctactcgcgaaagaagttctagaagtcttg
cgaccaattgaacaaatgacgaaagaactgtgtggagaaaagtatgtcacaatcagcaaa
atgattccaatgatctactgcctgaaaaaggaaattgaatcgctttgcatgcgcctgcag
acgttaaccgcacgaactttaatagatcgcctccagaagcaaatcgtgaaaagatttgga
cacataacaaacaatcgtattattgcggtttcgacaatactggatcctcgatttaatcga
ctgcattttcagcagaacgaacgtgtagcatgtgcgcaatcagtcaatttcattgctaaa
tgtatgagagaaattgaccgaacgaatacttctaacgataacgcaataataactgaaccc
aacgttgagaaacttgagacgtcgaataatttatggatgtatcacaaagaccttgttaaa
ggacaaattgcaaatgacgaagaaagaaaccaaaacgaaatgccaaccaatctaaggcat
tatttaaatcaaccactggcacagttagaagaaaatccaatgttttattggtctaagcag
tacaaaatgatgtacccaacgcttagcgaagttgcaaaaaagtacttgcccgtggttgca
acgtcggtaccttccgagagattattttcacgagctggtaatattttaactgaggacaga
aaccgactttctccagatcacctacagcaattattatttttaaattccttgacagccgaa
gaatggcagttgaaagactga
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