Vollenhovia emeryi: 105557664
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Entry
105557664 CDS
T06016
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
vem
Vollenhovia emeryi
Pathway
vem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105557664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vem03041
]
105557664
Spliceosome [BR:
vem03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105557664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_Nup120_160
WD40_RFWD3
Nbas_N
WD40_like
Tlp
Motif
Other DBs
NCBI-GeneID:
105557664
NCBI-ProteinID:
XP_011860355
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MSDDEDLVYVKKQKTVHYGSLEEAERARLAAAGESADEEKDAAGANDASNVSATGANVHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKLLRQLGEPICLFGEGPAD
RRTRLRELLASVGEDAIKKKHEEEDKPSHPLEKDTESTWYHEGPDSLQIARSWIASYSLP
RAKARLDKARQDLLLPAATRTAKRQELLKKLQALSIYCSQIGDRRPISFCQFSPNSKILA
TASWSGLCKLWSVPDCTLLRTLQGHNCNVGCIVFHPKATITEDVVGDNAGQTCVLASCAA
DGTVKLWSGGNGEEPLAEVEGHEPHRVSRIAFHPSGRFLGTCCYDASWRLWDLEQQAEVL
HQEGHARAVHCISFQCDGSVCTTGGHDSFGRVWDLRTGRCIMFMEGHLMSIFGIDFSPNG
FHIATASEDNTCKIWDLRKRTCIYTIPSHTNLLSDVKYQRTEGQYLVTASYDNTAKIWSN
KTWQPLKMLPGHDGKVMSVDVSPDHRFIATSSYDRTFKLWAPE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgaggacttggtctacgtcaagaagcagaaaactgtgcactatggctcg
ctggaggaggcggaacgtgcgcgactcgcggctgccggcgagtctgcggacgaggaaaag
gatgccgcgggcgcgaacgacgcctccaacgtttccgccaccggggcgaatgtacacatc
tcgaacgagtacatggagctcgaggacgagatgtccaaggaccggcaggcgctgttggaa
gaatttgaacgtaggaagaaggccaggcagattaacgtttcgacagacgactccgaggtg
aagaagctcctgaggcagttgggcgagccgatttgtctatttggggagggcccagcggat
cggaggaccagattaagagaattgttagccagcgtgggggaggacgcgattaaaaagaag
cacgaggaggaagataaaccgtcgcacccactcgagaaggatacggagtcaacttggtac
cacgagggcccggattctctgcaaattgcacgatcgtggatagcgtcgtattcgttgccc
agagcaaaggcacggctggataaggcaaggcaagatctgctattaccagctgcaactcgt
acagcgaaaagacaagagctcttgaagaagttgcaagcattgagcatttattgctctcaa
atcggcgacaggagacccatttccttttgccagttcagccctaattccaaaattcttgct
acagcttcatggtcgggcttatgcaagctatggtctgtacccgactgtactttgttgcgc
actttacaaggacacaattgtaatgttggctgtattgtttttcacccaaaagctacaata
accgaagatgtggtcggtgataatgcaggacagacttgcgtactggcgtcttgcgcagca
gatggtactgtgaaactgtggagcggcggcaacggcgaagaaccattagccgaggtggag
ggacatgaacctcacagagtctccaggatagctttccacccatctggacgatttctcggc
acatgttgctacgatgcatcttggcgattatgggatttggagcaacaagcggaagtactt
caccaagagggccatgcaagagcagtacactgtattagctttcaatgcgacggaagcgtt
tgcactacgggcggtcacgattctttcggcagagtatgggacttgcgtaccggcaggtgc
ataatgttcatggagggtcatctaatgtccattttcggcatcgatttctcgccaaatggt
ttccacatagcgacggcgagcgaggataacacttgcaagatatgggacttgcgaaagagg
acttgcatatacacgataccatctcacaccaatttgctatccgacgtcaagtatcagaga
acagaaggacaatacttggttaccgcatcttacgataacacagccaaaatttggtccaac
aagacctggcaacctctaaagatgctaccaggccacgatggaaaagtcatgtctgtcgac
gtgtcacctgatcataggtttattgcaaccagctcgtacgacagaacttttaagttatgg
gccccggaatga
DBGET
integrated database retrieval system
