Vollenhovia emeryi: 105558517
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Entry
105558517 CDS
T06016
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
vem
Vollenhovia emeryi
Pathway
vem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105558517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vem03400
]
105558517
DNA repair and recombination proteins [BR:
vem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105558517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
105558517
NCBI-ProteinID:
XP_011861622
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
RDALTNTVGSHIAEEDYCKSIYVLSPFFLPRILGAFLFALTHISDLSFLSITVQTQSYRT
QFSAIYIYIIRLGSTVDKLDTTIRFFNRSDYYTVHGSDALFAAQQVFKTTSVCKMIGAEP
HKTEGVILNKSHFETFVRDLLLVKQYRVEVYVNQGSSKNQNWMLEYKGSPGNLSHFEDIL
FGNNDIAVGVSVIAVKLGTEGKSRVVGLSCVDVVSTLISVAEFQDNESFSNLESLIVTLA
PKECLLIQGEGSYEFQTLKQIMERSNVLVTLRKKNEFSSDSIIDDLNTLIKFKKGQKQNS
QSLPEVNLNLAMSATSALIKYLDLTSDEGHMNQFKLNQLEQSRYIRLDSAAIKALNIEPH
IDVVPNLQGNPIGSILTLLDKCRTAQGHRLIAQWVRQPLRDLSLIKERHDIVELLVKNNE
LRSVLSDDYLKRIPDLQQLAKKLDRKKSALQDCYKIYLCVSYLPKLLEQLSPEENVTALK
TMIMDPLKELIEDMEKFQQLVEQTIDLEAAEKGDFMVNPGFADDFKTLKDAMDETEEIIQ
NQLHKAANDLSLEAGKVIKLESNQQFGYYFRITLKEEKILRNNRHYTILDSNKTGVRFRN
NKLNELNDDFMDARDKYLERQKEVITEIVGIAAGYSETVRTIGGVLACLDVLAAFASAAV
SANKVYVRPKMVPSEEGELNLLQVRHPCLEMQQGVDYIANDVNFKRDQCHFCIITGPNMG
GKSTYIRSIGVTALMAHIGSFVPCDEATISLLDCILARVGADDSQLKGLSTFMMEMIETA
AILKTATCNSLVIIDELGRGTSTYEGCGIAWSIAEHLARDIKSYCLFATHFHEITKLAEE
IPTVKNQHVTALVDDNKLTLLYKVKPGICDQSFGLHVAKMANFPPNVIEFAKRKQAELED
YQGVAFEGSDNPQKKQKIIQEGEVLISQFLKKCKTLDQSLSDADLESQVSSLKEDILSHK
NPYIAALFAAS
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
cgagatgctctcactaacactgtaggctcacatatagcagaagaagattactgcaaatcc
atttatgttctctcccccttcttcttaccgaggattctcggagcattccttttcgctctt
acacatattagcgatctttccttcttatccatcacagtccagactcagtcttatcgcaca
caattctcagcaatatacatatatataataagattgggttctaccgttgacaaacttgat
accacgatccggtttttcaatagatcagactattatacggtacatggaagtgacgctctc
tttgccgcacaacaagtgtttaaaacaacatccgtatgtaaaatgattggagctgagcca
cacaaaacggaaggagttattctcaataaaagccatttcgagacgtttgtgcgcgatttg
ttgctggtgaagcaatatagagttgaagtttatgtcaatcaaggctcctctaaaaatcag
aactggatgttggagtacaaaggttcacccggcaatctatcgcatttcgaagatatcttg
ttcggcaataatgacatagctgtgggtgtatctgtaatagctgtgaaactggggacagaa
ggaaagtccagagttgtcggcttaagttgcgtagacgtcgtttcaactctaatttcagtt
gctgaatttcaagataacgaatcattttcaaatctagagtcgctcattgtaactcttgct
ccaaaagaatgtttattaatccagggagaaggcagttatgaatttcaaactctcaaacaa
ataatggaaagaagtaacgttttggttaccttaagaaagaaaaatgaattttccagtgac
tcgatcattgatgacctgaacacgttaataaaatttaagaaaggacaaaaacagaactca
caatcattgcctgaagttaacctgaacttggctatgtctgcaacatcggctctcattaaa
tatttagatttaacatcagacgaaggccacatgaatcaatttaaactgaatcaactcgaa
caatcgcggtacataagattggattctgcagcaataaaagctcttaatatcgaaccacat
attgatgtagttcccaacttacaaggaaatccaattggtagcattttaacattactggat
aagtgcagaactgcgcaggggcaccgactaatcgcgcaatgggttcgacagcctcttcga
gatctatctttaataaaagaacggcacgatatcgttgagctattagtaaaaaataacgaa
ctaagatccgttcttagtgacgactatttaaaacgtataccggatctgcaacagcttgca
aagaaattggatagaaagaagtcggcgttgcaagattgttacaaaatctacctgtgcgta
tcatacttaccaaaactgttggaacagctttcaccagaagaaaatgtgacagcattgaaa
acaatgataatggatccactaaaggagctcatagaggacatggagaaatttcaacagctt
gtagagcagacaatcgacttagaggctgctgagaagggtgattttatggtcaatccagga
tttgcagatgattttaaaacactaaaagacgccatggatgaaacggaggaaatcattcag
aatcaactccacaaggcagcgaatgatcttagcttagaagcaggaaaagtgataaagctg
gaatcgaatcagcaattcggttattactttcgtatcacattaaaggaagagaaaatactt
aggaataacaggcattacactattctggattctaataaaactggcgtgagattccgaaac
aataaattaaacgaactgaatgacgattttatggatgccagggacaaatatttggagagg
caaaaagaagttattacagagattgtaggaattgcagctggctatagcgaaacagtgcgt
acgatcggtggcgtgctggcatgcctcgacgttctcgctgcatttgcttccgcagcagta
agtgctaacaaagtatacgtgcgccccaaaatggtaccgagcgaagaaggtgaattgaat
ctccttcaagttagacacccgtgtttggaaatgcagcaaggagtcgattatattgccaat
gatgtcaattttaaaagagatcagtgccatttttgcattattactggcccgaatatggga
ggtaaaagtacttacatcagatctattggtgtaaccgcattaatggctcacattggtagt
tttgttccttgtgatgaagcaactatatcattgctggattgcatattggctagagtggga
gctgatgattcccagctgaaaggattgtcaacattcatgatggaaatgatagaaactgct
gctattttgaagacagcgacttgtaactctcttgtaattatcgacgaattgggcagaggt
acatctacctacgagggttgtggtatagcgtggtcaatagccgagcacttggcaagggat
attaaatcgtattgcttatttgctacgcactttcacgagattaccaagttagccgaagaa
atacctactgtaaaaaatcaacatgttaccgctcttgtcgatgacaataaattgacatta
ctttataaagtaaagccagggatttgcgatcaaagttttggccttcatgtcgctaagatg
gctaattttccgccaaatgtaatagagttcgctaaaagaaagcaagcagagctcgaggac
tatcaaggcgtagcctttgaaggatctgataatcctcagaagaaacagaaaatcattcag
gagggtgaagtccttatttcgcagtttctgaagaagtgtaaaactttggatcagtcttta
tccgatgccgacctagaaagtcaggtgtcgtcgctgaaagaggatattctctcccacaag
aatccttacatcgcggcgttattcgccgcttcgtaa
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