Vollenhovia emeryi: 105559363
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Entry
105559363 CDS
T06016
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
vem
Vollenhovia emeryi
Pathway
vem03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105559363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vem03021
]
105559363
Transcription machinery [BR:
vem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105559363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
105559363
NCBI-ProteinID:
XP_011862981
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MNSSTVSKPAVAPSVQEFSIRVPKNSKKKHNVMRFNATLNVDFSKWTQVKMERENNMKEY
KGIEEEMPKFGAGSEFGRDAREEARRKKYGITSRKYKPEDQPWILKSGGKTGKKFKGIRE
GGVSENAAYYVFTHAADGAIEAFPLHEWYNFQPIQRYKALSAEEAEQEFSRRNKVMNYFS
LMLRKRLRNDEDGGDEEELVEVGKGKKPGKKEKELKISEMDEWMDSDDDESGSDEDETKK
GSEEEEDGKNNKKDKGNEHEQKKKKKKKNVSDDEAFEESDDGDEEGKECDYISDSSDSES
DDQQKSVAEEDALRKLLASDEDEDDEEQTDKKDGEEDKDEDEEGKEKDDKDKDKLGKEMD
KRKDKKKKKKAKKKDQKKSVSGKDSSSDFSSDSDSDSDTTLKDNKKPNSAHSSRCSTPTP
ATSGVSDSLKRKQSGSPDLSQAKKLKLDNFNLVPVTSYIPGANESGITEDAVRRYLMRKP
MTTTELLQKFKSKKTGLTSEQLVNIMTQILKKINPTKQTIKNKMYLSIKAQSN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaagtacagtttcgaagcctgccgttgcgccatcggtacaggaattcagcatt
cgagtaccaaaaaatagcaagaagaagcacaatgtcatgaggttcaacgcgacgttgaac
gtagatttctcaaagtggactcaagtgaagatggaacgggagaacaatatgaaggagtac
aagggcatagaagaggaaatgcccaagttcggcgccggatccgagtttgggcgtgacgcc
agggaggaagccaggagaaagaaatacggtatcaccagcagaaagtacaagccggaggat
cagccgtggattttgaagtcgggtggaaaaactgggaagaagttcaaaggcatccgggag
gggggagtcagcgaaaatgctgcttactatgtcttcacgcatgctgctgacggcgccata
gaagcgtttcctttacacgaatggtataattttcagccgattcagaggtacaaggcactc
agcgccgaggaggcggagcaggagttcagtcgtagaaataaggtgatgaattacttctcg
ctgatgctgcgcaagagattgaggaacgatgaggatggcggggacgaggaagagttggtt
gaagttgggaagggcaagaaaccgggtaagaaggagaaggaactgaagatttcggagatg
gacgagtggatggacagcgacgacgatgagtcgggcagcgacgaggacgagactaagaag
ggctctgaggaggaggaggatggaaaaaataacaagaaggacaagggtaacgaacatgaa
caaaagaagaagaagaagaagaaaaatgtctcggacgatgaggcgttcgaggagagcgac
gacggcgatgaggagggaaaagaatgcgattatatttctgattcctccgattccgaatcg
gacgatcaacagaagtctgtcgcggaagaggacgcgttgaggaaattgctcgcatctgac
gaagacgaagacgacgaggaacaaacagataagaaggacggagaagaagataaggacgaa
gacgaggaaggaaaagaaaaggacgataaagataaggacaagcttggtaaagaaatggac
aaaaggaaggacaagaagaagaagaagaaagccaagaaaaaggatcagaagaaatcagtg
tcgggaaaggattcgtctagcgatttctccagcgactcggattcggattccgatacaaca
ttaaaagacaacaagaaaccgaacagtgcacatagttcaagatgctcgacgccaacacct
gcaacgtccggtgtctcggattctctcaagagaaagcaatctggctctcccgatttgtcg
caagcgaaaaaattgaaactcgataatttcaacctggttccagtaacgtcgtatataccg
ggggcgaacgaatcgggaatcacggaggatgcagtgaggcgatacttaatgcgcaagccg
atgacgacgaccgagctgttgcagaaatttaaatccaagaaaactggcctcacatccgag
caacttgtcaacattatgactcaaatactgaagaagataaatcctaccaagcaaactatc
aagaacaaaatgtatttatcaatcaaggcgcaatccaactga
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