Vollenhovia emeryi: 105559439
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Entry
105559439 CDS
T06016
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vem03036
]
105559439
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
105559439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PT
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
105559439
NCBI-ProteinID:
XP_011863105
LinkDB
All DBs
Position
Unknown
AA seq
2182 aa
AA seq
DB search
MPERIKLKMNGVVPSVPITTLAGIASLTDLLPEMPLPTPLPQTLTNKSLLFHPRVAEEAT
ILLSLRDENLVPQLITSLSHTSSEHIELKDNYPSAEQSLENEQNTPELLKAILQLNPDVF
RGTQHNSPRNWGAQGAPMLHANQSPASYGRFSPSYSSSSGSRQTPQGSPAQTAASRSVLP
PLVPGGIDANCMNPLSNVNLQPNMYSPAHMNSPNASLASLTNMTPQHNMAGMPPHNMHMA
SPMRNVPLQQHPAIGMQQNLYDSMMNQQVHHALGSGQALDIDNAVQENQQFLLDPVASLS
DIDLPIENIDTKQSVDHAIQHLLPTSQATTYPNIHATDIVNVLDPAAASMASNVQHQQNN
NSEKSIKFGTDKLKEPIVMLNRLSLTDQALMQKSLAAFAEKSPSRAAKMGISNRDDATKT
DSESEEEIGKNNKYFKARAKERQVQREKEKAERRKSEDKGRRRKKITEDDDEEDDKRDAS
FSPTKPKIRKIEKKLVPVLAKLSVEELMETNTYQRFNSTIETIFENTEDITANADLEDDG
EVLPEMLIPKYQLHDLCTEAAKLKTLGAMESIPTDKLVRLLNILEKNIRDGARVSPLVDP
DDDVDEGRLWMQLAMERVQRAVDASLIALHIMTSSNMPKTVYLEDVIDRIVLFMKFQLQN
TIYPSFDPVYKIDTKNKTDNFNSSGRKKRGHTKEVREKSILQVYNKMHELVGLLAELLNI
QVLTDTSVLHASSLGVAPFFVESVSDLQLSALKLVTVIFTKYEKHRRLLLDDILASIARL
PSSKRSLRTYRLNSEDYIQMLTALVLQLIQCVVVLSDSKSKEDEEKKPSHVDADVFIINR
YETATRIAGNFLTVFLNKCGSKGEEIDYRPLFENFVQDLLATVNKPEWPAAELLLSLLGN
LLVGHFSNKSSDMSLRVASIDYLGVVAARLRKDAVNSQCKLSTIDQIIRDIKLEQQKDSD
YDQIKDKEIVGLSEDEERTVFLQKVLLDYLAVNGTKDPALVYARHFYLAQWYRDCAMEKS
RVGQLKNSPSKKMHKKRTKKKNRHHSSDQDTESELDEQDPDENDNNEQKNSEAYRIIEEK
KKYIISRIRPCSTGTKPDILQTYIDYNSAELISQYLASKRPFSQSFDRYLKQILHVLTES
SIAIRTKAMKCLTMIVEADPSVLGRVDMQMGVKHSFLDHSTSVREAAVDLVGKFVLSRPE
LIDKYYDMLSARILDTGVSVRKRVIKILKDICMECPDFPKIPEICVKMIRRVNDEEGIRK
LVMEVFQNMWFTPVRERPTLDSESLLRKVMNITDVVAASKDMGLEWFEQLLVSLFKPKED
KDDSTKMQTEPPRALLTACKQIVDCLIENVLRLEETNLDSEKSEKKGSSQRLVACLTTLY
LFAKIRPRLLVNHAITLQPYLSLKCQTQGDYQIISSVAHTLELVVPLMEHPSETFLAQLE
EDSVKLILQHDRSVVASCLSCLGSVVNNVTRNYKLIRDCFKKYYGHLTEYKSFYVKDPNN
PMLIRYRPFFRRALFTVGLLLRHFNFMDPEVIEGLADNIKDQVFETLSYFVHLNNDDIRH
FTLSAIGSLCIRHYEFMMLPELKELYHHLLTSEYALVHMRIQVLNNIEVYLQEEEKRMIK
QDLEWAKLSKQENLKEMGDVSSGMASTVIQLYIKEILESFLHVNISVRHAALKVIQLILA
QGLVHPVQIVPYLICMSTDCEKAVSHSADKQLQDIEKKYPGFIHMKSQFGIKLSYRLQKI
LQDNITVRGMRTKDGEFPGALNGFLYTILRNTKQQRRAIVLSFLKHFDEAAKTTLSQMLY
LADNLAYFTYQVQDEPLFIIHHIDIIISMSGTNLLQSFKEALLPKENSAGQSGHSRHTMG
QPMAQPMGQPMVQPTGQTTVIGPDGQPKPDQLLSTLEDEEDDEEDEEALLARLPGDTTLL
REYITASQGFLLLLTLRQHLKDLYGFSDAKIGQYSPSEAAKVYEKAVNRKNNLLFEPKAT
LQRLREGVTNIIELDASGRKKLVKEYLDFKQLMLKFDPEEPDDDGGNDAADTSGGGKHGA
ENPQAARIPPHPQADGRTIVDGAVIGDAAAALVIAAGQQQQQYQLPLQSNLTAPMEYPNN
SVNSLPIMAAAATTTTVAAAPATTPRVPKLTIHTHPDARESHRKHRAHKTDKSVRRHKKK
KRRRISDTSDSGEDYSDPDFLV
NT seq
6549 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacgaatcaaactcaaaatgaatggggttgtaccgagtgtgccaataactacc
ctcgctggtatcgcgagtctgacggacttgttacctgaaatgcccctgccgactccgctg
ccgcagaccctgactaacaagtctctgctgtttcacccacgagtagcggaagaggccacg
atactgctgagtcttcgcgatgagaatctcgtgccgcagctgataacgtcgctttcgcac
acgtcgtcggaacacatcgaactcaaggacaattatccgagtgccgagcagtcgctggaa
aacgagcagaacacgcccgagttgctcaaggcgatcctgcagttgaaccctgacgtattc
agaggcacccagcacaattccccgaggaactggggcgcgcaaggtgcgcccatgttgcac
gcgaatcaatcgccggcgagctatggtcgtttctcgccgtcctactcgagctcctcgggc
tccaggcagacgccccaaggtagtccggcgcagaccgcggcaagcagatccgtacttccg
ccgctggtgcccggtggcatcgacgcgaactgtatgaatcccctgtcgaacgtgaatctt
caaccgaacatgtactcgccggcgcatatgaactcccccaatgcatcgctggcgtctctc
accaatatgacacctcagcataatatggctggtatgccgccgcacaatatgcacatggca
tccccgatgcgcaatgtgcctctgcaacaacatccggccataggtatgcagcagaacctt
tacgattccatgatgaatcagcaggtccatcacgcgttaggcagtggtcaggcgttagac
atcgataacgcggtacaggagaatcagcagttccttctcgacccggtagcgagtctctcc
gacattgatctgccgatagagaacattgacacgaagcaaagcgtcgatcatgcgatacag
cacttactaccgacttctcaggccacgacctatccaaatatacacgccaccgacatagtt
aatgttttagatccggctgcggccagcatggcgtccaacgtgcaacatcaacagaacaac
aactccgagaagagtataaaatttgggacagataagctgaaagagcccattgttatgtta
aacagattatcgttgactgatcaggcgcttatgcagaagagtttggcggcgtttgcggag
aagtcgccgagtcgcgcggcgaaaatgggcatttccaatcgcgacgacgcgacgaaaacc
gactccgagagcgaggaggagatcggcaagaataacaagtactttaaagctcgcgcgaaa
gagcggcaggtgcagcgggagaaagagaaagcggagcggcggaaaagcgaggacaagggc
cgcaggcgaaaaaagataacggaggacgacgacgaggaggatgacaaacgggatgcatcg
ttctcgcccacgaaaccaaaaatacgcaagatcgagaagaagttagtgcctgtattagcc
aagctgagcgtggaggaattgatggagaccaatacgtaccagcgattcaactctaccata
gagacgattttcgagaacacggaggatatcacggcgaacgccgatctggaggacgatggt
gaggtgcttccggagatgctcatccccaagtatcagttgcacgatctgtgcacggaagcg
gccaaactgaaaacgttgggcgccatggaatcgatacccacggataaattggtgaggctg
ttgaacatcctggagaagaacatacgtgacggcgcgagggtgtcgccgctcgtggacccg
gacgacgacgtcgacgaaggacgattgtggatgcagctggcgatggagcgggtacagcgc
gccgtggatgcgtcgttgatcgcgttgcacattatgacctctagcaatatgcccaagacg
gtttatctggaggacgtgatcgaccgaatagtccttttcatgaagttccagctgcagaac
accatttatccctccttcgatcccgtatacaagatagacacaaagaacaagactgacaat
tttaattctagcggacgcaagaaacgcgggcatacgaaggaggtgcgggagaagagtatt
ctgcaggtctacaacaagatgcacgagctggtgggtctgttggctgagctgttgaacatt
caggttctaacggacacgagcgttctgcacgcgtcgtcgctgggcgtcgcaccgtttttc
gtcgaatcagtgagcgatctccagttgagcgcgttgaagctcgtcaccgtaatatttacc
aagtacgagaagcacaggagactactactggacgacatcctggcgtcaattgcgagacta
cccagcagcaagaggagtttacgtacgtacaggctcaactccgaggattacatacagatg
ttgaccgcgctggtcctgcagcttatccagtgcgtggtggttttgtccgactccaaatcg
aaggaagacgaggagaagaaaccgagtcacgtggacgccgacgtctttattatcaataga
tacgagaccgccaccaggatcgccggcaattttttaacggtattcctcaacaaatgcggc
agcaagggcgaggagatcgattacaggccgttgttcgagaatttcgtacaagacttgttg
gcaacggtgaataaacccgagtggcccgctgccgaattgctgttgagtcttcttggaaat
ctgttggtgggacatttttctaataagagctccgatatgtcgcttcgagtagcttccatc
gattatctcggcgtggtagcggccagattgcgcaaggacgcggttaattcgcagtgcaag
ttgtcgaccatcgaccaaattattcgggacatcaagctcgagcagcaaaaggactctgac
tacgatcagataaaggataaagaaatcgtaggactgagcgaggatgaagaaaggactgtg
tttctgcagaaagtacttctggactatctggccgtcaacgggacgaaggacccggctctc
gtatacgcgcgtcacttttatctggcccaatggtatcgggattgcgcgatggagaagtcg
cgggtgggccaattgaaaaacagcccgagcaagaagatgcacaagaaacggacgaagaag
aaaaatcggcatcacagcagcgatcaggataccgagtccgagttggacgagcaagatcca
gacgagaacgataataacgagcagaagaattcggaggcttaccgaatcatcgaggagaag
aagaagtacattatcagcagaataaggccttgcagcacgggaacgaaacccgacatcctt
cagacatacattgactacaattctgcggaactgatctcgcaatatctcgcgtccaagaga
ccgttctcgcagagttttgatagatacctaaagcaaattcttcacgttttgacggaatcg
tcaattgccattagaaccaaggcaatgaaatgtctcacgatgatcgtagaggctgatccg
agcgtgctggggcgagtggacatgcagatgggtgtgaagcattcatttctcgatcactcg
acgtcagtacgggaggcagcggttgacttggtaggaaaatttgtattgagtaggcccgag
ttgattgacaaatactatgacatgctgtcggcgagaattctggatactggcgtgagcgtc
cgaaagcgcgtcattaaaatcctcaaggacatctgcatggaatgcccagacttcccgaaa
atcccagaaatatgcgtgaagatgataaggagggtgaacgacgaagagggcattcggaag
ctcgtcatggaggtattccaaaacatgtggtttaccccagtgagagaacgtccaactctt
gattcggaatccctcttgaggaaagtgatgaacatcacggacgttgtagcggccagcaag
gatatggggctcgagtggtttgagcaactcttggtaagtttgttcaagccgaaggaggac
aaggatgacagcacgaaaatgcagacggagccgccgcgggctttgctgacggcgtgcaag
caaatcgtggactgcctgatcgagaacgtgttacggttggaggagacaaatctggattcg
gagaagtcggagaagaaaggctcgtcgcagagactggtcgcgtgcctgacaacgctctat
ctgttcgcgaagattcgaccacggctgttggtcaatcacgcgatcactctacaaccttat
ctgagtttgaagtgtcagacacagggtgattatcagattatcagtagcgtcgcgcacaca
ctcgagttagttgtgccgctgatggaacaccccagtgagacttttttagcacagttagaa
gaggattcggtcaagctaatcttacagcacgatagatcggtggtcgcgagctgtctttcg
tgtctgggctctgtagtcaataacgtcacacgaaactataaactgatacgagactgcttc
aagaaatactacggacacttgacggagtacaaatcattttacgtgaaggacccaaataat
cctatgttaataaggtacagaccgtttttccgacgagcgctcttcacggtcggcctgttg
ctgcgtcattttaacttcatggatccagaggtgatagagggcctagcggacaacatcaag
gatcaggtcttcgagacactcagctatttcgttcacttgaataacgacgatatccgacac
tttacgctgtcggctatcggttctctctgcatacgacattacgagtttatgatgctgccg
gagctgaaggagctctaccatcatttgctcacatccgaatacgcgttggtccatatgaga
atccaggtgcttaacaacatcgaggtgtacctgcaagaggaggagaagagaatgatcaag
caggatctggaatgggccaagctgtcgaagcaggagaacttgaaggaaatgggcgacgtg
tcgtcaggcatggcgagcacagttattcagctctacatcaaggagatcctcgagtccttc
ctgcacgtcaacataagcgtgcggcacgcggccctcaaagtcattcagctgatcctggcg
cagggcctggtacatcccgtccagatagtgccctacctgatctgcatgagcaccgactgc
gagaaggctgtgagccacagcgcggacaagcagttgcaggatatcgaaaagaaatatccg
ggcttcattcacatgaagtcgcagtttggcatcaagttgagctaccggctgcagaagatc
ctgcaggacaacatcacggtgaggggcatgcgaacgaaggacggcgagttcccgggcgcg
ctcaatggtttcctctacacgatcctgcgcaacacgaagcagcagaggcgggcaatcgtg
ttgtctttcctcaagcacttcgacgaggctgccaagaccactctgtcgcagatgctttac
ctggcggacaatctcgcctactttacatatcaagtacaggacgagccgctcttcatcatc
catcacatcgacattatcatttctatgtctggaacgaatctactgcaatctttcaaagag
gctttgctacctaaggagaacagcgcggggcaatcggggcattccaggcatacgatgggg
cagccgatggcgcagccgatgggacagccgatggtgcagccaacgggacaaacaacggtg
atagggccggatggtcagccaaaacccgatcaattgttgtcgactctcgaggatgaagag
gacgatgaggaggacgaagaagctcttctggccaggctgccaggcgatactaccttgctc
agggagtatattaccgccagtcaaggctttttgcttctattaacacttcgccaacatctc
aaggacctttatggcttttccgacgctaagatcggccaatattcaccgtcggaagcggcc
aaggtctacgagaaggcagtgaatcgtaaaaacaatctactttttgagcccaaagctacg
ttgcagaggctgcgggaaggcgtgacgaacatcatcgagctggacgcgagcggcaggaag
aagctcgtgaaggagtatctggactttaagcagctgatgctcaagttcgatccagaggag
ccggacgacgatggcggcaacgacgccgccgataccagcggtggtggcaagcacggcgcg
gagaatccgcaagcggcgaggataccgccgcatccccaggctgacggcaggacgatagtc
gacggcgctgtcattggagacgccgccgccgccctggttatcgcggctggccagcagcag
caacagtatcagttaccactgcaatcgaatctgaccgctccaatggagtatccgaataat
tcggtaaactcgctgccgatcatggcggcagcggcgacgacgacgaccgtcgccgcggca
ccggcgacgacgccacgggtgccgaagctgacgatacacacccatccggacgcgagggag
tcgcaccggaagcaccgcgcgcacaagacggacaagtcggtgaggaggcacaagaagaag
aagaggagaagaatctccgacaccagcgacagcggcgaggactacagtgaccctgacttc
ctagtgtga
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integrated database retrieval system