Vollenhovia emeryi: 105559636
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Entry
105559636 CDS
T06016
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vem03021
]
105559636
03036 Chromosome and associated proteins [BR:
vem03036
]
105559636
Transcription machinery [BR:
vem03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105559636
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105559636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
HHH_9
SH2
Tex_YqgF
Spt6_S1
HTH_10
Tex_N
Motif
Other DBs
NCBI-GeneID:
105559636
NCBI-ProteinID:
XP_011863463
LinkDB
All DBs
Position
Unknown
AA seq
1769 aa
AA seq
DB search
MAEYLDSEADVSEGEEELNQNEKKRLRKLKAVEESDDEEEDDEDQLREELKDLIDDNPID
ESEGEDSDGSNHHKKRKKSDDEDFDDRLEDEDYDLIEENLGVKFERKRFKRLRRIQDEES
EEEQEKEADEERDAIANELFEGSGDERDITEDERRSERSHRPEAETFEEGSDEGEYTDAD
DFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEEED
EYMDEDVDAERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPERMQL
RSVPVTSVPEGSDELDLEAEWIYKQAFCKPTVSIQDSHLNPEAKERARKGPQTIGKIKKA
LDFIRNQHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLCQRKENLLKLFEKMRN
YQLDEVMKNPDAPLPDSVRVIKDDDIERLKNVQTSEELNDVYNHFMLYYSHEIPKMQETV
RQKEKQARREERIQRRKQQIAEAEENGEDPPEEEEPLEEEEIDETLKQAVRSGPYTICRK
AALDGLAKKFGLTPEHYAENLRDNYQRHEVDQEPTEPTTIALEYCSSRFKAAEEVLKAAQ
LMVAIQLAREPLVRKCVREMYMERAKVSINPTKRGIKEIDENHPIYTMKYLKDKPVRDLV
GVHFLNMIIAEEDKLITITFSDTIEGNTSSNYVDEMKQLYCRDEFSKLVQDWNALRVGSV
EIALNRMVIPHLKKELRTNLVAEAKECVMRSCCRKMYNWIKVAPYSCEFPEEEDEEWDTS
KGLRVMGLAFVPDYSQAAFTCLVAPDGECTDYLRLPHLMKRKNSHREDEKTMKEADLLAL
KNFIATKKPHVVVVAGESREATMMAADIKECITNLAMEEQFPNIQVEICENELAKIYSNS
NKGVSEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHNLQDQLPKEELLE
NLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRLENRTQ
LVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEY
DDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYKDLR
VAYQSPSPEKLFDVLTKETPETFYVGKLVLATVVGISHRKPQGDQLDQANPVRNEETGLW
QCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHVANPCER
VGMGQIIHCRIIKIEVDRFSVECTSKSSDLADKNHEWRPQRDPFYDTDTEQRDVKVEEDA
KKAKQRQIYVKRVIVHPSFHNISFAETVKLMQTMKQGEAIVRPSSKGADHLTVTWKVTDD
ILQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYKHGV
EGIKDKAEEILKEQKKENPSGIPYIMSAAKTFPGKFLLSYLPRTRCRHEFITVTSEGFRF
RAQMFGRVSDLLRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYTTTPGTVSGMNQEAIQRV
AQNLPHHMLHSLSQVANQTPHHYPPHTPGAASATGGYGGVHTYPNTPYTPSGQTPFMTPY
QTPHHTPHHGQPTPRYGQQTPSHHQGPFVHPPPPSMTPGHHRSAQSHRPTPPPLSTPSGD
PTDWKKAAEAWARLKSGPRVSGSTPRYEESRKTPRNYDEPAGRTTPSGRSRPSSARTPSY
KSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtatctcgactccgaggcggacgtgagcgagggcgaggaggagctgaatcag
aatgagaagaagcgactgcggaagctgaaggccgtcgaggagagcgacgacgaggaggaa
gacgacgaggatcagttgcgcgaggagctgaaagatttgatagacgacaatcctatagac
gagagcgagggcgaggacagcgatggttctaaccatcacaagaaacgtaagaagagcgac
gacgaggattttgatgatcgcttggaagatgaggattacgatctgattgaagaaaacttg
ggcgttaagtttgaaagaaagcgtttcaaacgccttcgaaggatccaagacgaggagtcg
gaggaggaacaagagaaggaagcggacgaagaaagggacgccattgccaatgaattgttc
gaaggctctggagacgaaagggatatcacggaggacgagagacgaagcgagcgaagccac
aggccagaggcggaaaccttcgaggaaggcagtgatgaaggagaatataccgatgcggat
gattttattgttgacgatgatggtagacccattgcggagaaaaggaagaagaagaaaccg
atattttccgatgcggcactgcaagaggcacaagacattttcggcgttgattttgattat
gatgaattcggtaaatatggcgaggaggattatgaggaagaggaggaagaagaagaggat
gaatatatggacgaagacgtcgatgccgaacggccacgacggccgaagaaacagctgaag
aaaaagaccacgagaaagagtatcttcgagatttacgagcccagcgaattgaaacgtggt
cactttactgatatggacaacgagatacgtaatacagatataccagaaagaatgcaactt
cggtctgtaccggtcacatcagttccggagggttccgatgagctggatctcgaggcagaa
tggatctacaagcaggcgttttgcaagcctacagtttctattcaggattcccatttgaat
cccgaggcaaaggagcgggcgcgaaaaggaccccagaccatcggcaagatcaagaaagcc
ttggacttcatacgcaatcaacactttgaagtcccctttatatccttctacaggaaggag
tacgtgctgcccgagctgaatatcaacgacctgtggaaggtttacaagttcgacgccaag
tggtgtcagttgtgtcagcggaaggagaacctgcttaagctgttcgagaaaatgcgcaac
tatcaactggacgaagtcatgaagaacccggacgcgccactgccggatagcgtgcgagtg
attaaagacgacgacattgagcgactgaagaacgtgcagacgagcgaagagcttaacgac
gtctacaatcatttcatgctgtattacagccacgagatcccgaagatgcaggagaccgtg
cgacaaaaggagaagcaggcgcggcgcgaggagaggatccagcgacgcaaacaacagatc
gccgaggcggaagaaaacggcgaggatccgccggaggaggaagagccactggaggaagaa
gagatcgacgaaacgttgaagcaggccgttagaagtggcccgtacacgatctgtcgaaag
gccgctctggacggtctggcgaagaaattcggcctgacacccgagcattacgccgagaat
ctgcgcgacaattatcagcgtcacgaggtggatcaggagccgaccgagccgacgacgatc
gcgctcgagtactgcagttcgcgattcaaggccgctgaggaagtgctgaaggctgctcag
ctgatggtggcgattcagttggcgcgcgagccgctcgtgcgtaaatgcgtgcgcgagatg
tacatggagcgcgccaaggtatccataaatccaaccaagaggggcatcaaagagatcgac
gagaaccatccgatctacacgatgaagtatctcaaggacaagccggtgcgcgatctcgtg
ggcgtgcattttttgaatatgataatcgccgaggaggacaagctcatcacgattacgttc
agcgacaccatcgaaggcaacaccagcagcaactacgtcgacgagatgaagcaactctat
tgccgggacgagttcagcaaactcgtgcaggactggaacgccttgcgcgtaggcagcgtc
gagatcgcgctcaaccgtatggtgataccgcatctgaagaaggaactgcgcacgaatctg
gtcgccgaggcgaaggagtgcgtgatgcgctcgtgctgtcgcaagatgtacaactggatc
aaggtcgcgccgtacagctgtgagtttcccgaggaagaggacgaggagtgggacactagt
aaaggcctgcgcgtcatgggcctggcctttgtgcccgattactcccaagcagctttcact
tgtctggtcgcgcccgacggcgagtgtacggattacctgcgcctgccgcacttgatgaag
cgcaagaacagtcaccgcgaggacgagaagacgatgaaggaggccgatctgctggcgctg
aaaaacttcatagctacgaagaagccgcacgtagtcgtggtggccggcgagtcccgggag
gcaacgatgatggctgccgacattaaggagtgcatcactaatctggcgatggaggagcag
tttcccaatatccaggtggagatatgcgaaaacgagctcgccaagatctactccaacagt
aacaagggtgtctcggagttccgggattacccggagctgctgcgccaggctatctcgctc
gcgagaaggatgcaggatccgctggtggagttctcgcaattgtgcaccgccgacgaggag
attctctgcctcaagtatcacaacttgcaagatcagctacccaaggaggagctgctggag
aatctgtatttggagttcgtcaatcgcgtaaacgaagttggcgtggacgtcaataaggca
gtccagcaggcgtactgcggcaaccttgtgcaatttgtttgcggtctcgggccgcgaaag
ggtcaggcgctcatcaagatgctgaagcagacaaatcagcgattggaaaacaggacgcag
ttagtcaccgcgtgtcacatggggccgaaggtgttcattaattgcgctggcttcatcaag
atcgacaccaacagcctgggcgacagtaccgaggcgtatgtggaggtgctggacggttcg
cgcgtacatcccgagacctacgagtgggccaggaagatggcggtcgacgctctggagtac
gacgatgaggacgccaatcccgccggtgctctggaggagatactcgagtcgcccgagcgc
ctcaaggacctggatctcgacgctttcgccgaggaactcgagcggcagggcttcggcaac
aaatgcgtcactctctacgacatcagggccgagctgaacagccgctacaaggacctacgt
gtggcgtatcagtcgccgagcccggagaaactgttcgacgttctcaccaaggagacaccc
gagaccttctacgtcggcaagctggtgctggctaccgtggtcggaatcagtcaccgaaag
ccgcagggcgaccagcttgatcaggcgaatccggtgcgaaacgaagagaccggtctgtgg
cagtgcccgttctgcctgaagaacgatttccccgagctgtcggaggtgtggaatcacttc
gacgccggcgcctgcccgggcaaggccaccggcgtgagattgcgactggacaacggcatc
tctggatacattcacataaaaaatctgtcggatcggcacgtcgcaaatccttgcgagaga
gtcggtatggggcagatcattcactgccgaattattaaaatcgaggtagatcgattcagc
gtcgaatgtaccagcaagagcagcgatctcgctgacaagaatcatgagtggaggccgcag
cgagatccattttatgacaccgacaccgagcaaagggacgtaaaggtagaagaggacgcg
aagaaggcaaagcagcggcaaatctacgtgaaacgcgtcatcgtccatccgtccttccac
aatatcagtttcgccgagacggtaaagctgatgcagacgatgaagcagggcgaggcgata
gtgagaccgagcagcaaaggtgccgaccacttgacagtcacgtggaaagtcaccgacgac
attctgcagcacatcgacgttcgcgaggagggcaaggagaacgctttttcattgggacag
agcctgtggatcggcaacgaggaattcgaggatttggacgagattatcgctcggcacgta
aatcccatggcggcttacgcctccgaattattggacttcaagtactacaagcacggtgtt
gagggaatcaaagacaaagcggaggagatactgaaagaacagaagaaggaaaaccctagc
ggaattccctacatcatgtcggcagctaaaacctttcccggaaagttcctactctcgtat
ctgccgcgtactcgctgccgccacgagttcatcacagtgacatccgagggctttagattt
cgcgcgcagatgttcggtagggtgagcgatctgttgcgctggttcaaggaacacttcagg
gatcccgttcctggccaatccactccgagtacaccgcgcggcgcgatgacttctaggaca
ccttacactactacgccgggaacagtcagcggtatgaatcaagaagcaatacagcgcgtt
gcacagaaccttccgcatcacatgttgcactcgctgtcgcaagtggcgaatcagacgccg
catcactatccgccgcacacccccggggcggccagtgctaccggcggatacggcggagtg
cacacgtatccgaacacgccgtatacgccgtccggccagactccatttatgaccccgtat
cagacgccccatcacaccccgcatcacggccagcccactcccagatacggccagcaaacc
cccagccaccatcaagggcccttcgtgcatccaccgccgccctcgatgacacccggccat
cacaggtccgctcagtcgcacagacctacaccaccacccctgtccactccttccggcgat
ccgacggattggaagaaggccgccgaggcgtgggcacgtttgaaaagcggcccccgagtc
tccggatcgacgcccaggtacgaggagtccaggaaaactccgcgtaactatgacgagccg
gctggcagaacgacaccctccggcagaagcagaccgtcgtccgcgcgtactccgtcgtac
aaatctccgcggggcactccgcatacgaattctagtccacggagtatgtccctcagtgga
gatggtactcctctgtacgacgaaagctaa
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