Vollenhovia emeryi: 105559680
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Entry
105559680 CDS
T06016
Name
(RefSeq) probable histone-binding protein Caf1 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
vem
Vollenhovia emeryi
Pathway
vem03082
ATP-dependent chromatin remodeling
vem03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105559680
03083 Polycomb repressive complex
105559680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vem03036
]
105559680
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105559680
Histone modification proteins
HAT complexes
HATB complex
105559680
HDAC complexes
Sin3A-HDAC complex
105559680
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105559680
PRC2.2
105559680
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105559680
Heterochromatin formation proteins
Other heterochromatin formation proteins
105559680
Chromatin remodeling factors
NuRD complex
105559680
NuRF complex
105559680
NuRF complex (fruit fly)
105559680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Mucin-like
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
105559680
NCBI-ProteinID:
XP_011863561
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MERNRRVCYTDTLSKITKVNLELSPESDEKRSIRKRHPARIKRRRDEQEFNTTEENNNPT
ADMIEGNKSPTADILEENKNPTADILEENKNPTADILEEENMESNEIETIELLDDKTAEE
DGTKNCTGAETTRNEGDFTQLHEKLKYLLPDNHPRENLSAAVLRSEGFDDAVEERIINEE
YKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLL
IASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARFMPQNPCVI
ATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH
TICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRCN
NTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI
FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSEDAEDGPPELLFIHGGHTAKISDF
SWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPGSEIETGGS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtaaccgtcgcgtatgctacacggacactctctcaaagattacgaaggtaaat
cttgaattaagcccggaatcagacgagaaacgtagcattcgcaagagacatcctgcacgt
ataaagaggagaagagacgaacaagaatttaatacaacggaggaaaataacaatccaaca
gcagatatgatagagggaaataaaagtccaacagcagatatattagaggaaaataaaaat
ccaacagcagatatattagaggaaaataaaaatccaacagcagatatattagaggaggaa
aacatggagtcaaatgagattgaaacgattgaactacttgatgacaaaacggctgaagaa
gacggtactaaaaactgtactggagctgaaaccacgagaaacgagggtgacttcacacaa
ctacatgaaaagttgaaatatcttttgcctgacaatcacccgagagaaaacttaagcgcc
gctgtacttcgttcagagggcttcgatgacgctgtggaggagcgtattatcaacgaggaa
tataaaatatggaagaagaacacaccgtttctgtacgaccttgtgatgacacatgcttta
gagtggccatccttgacggcccaatggctgcccgacgtcaccagaccggagggaaaagat
tattccatccacaggttaattctgggcactcacacttcggacgaacaaaatcacctgctc
atcgctagcgtccagctaccaaatgaagacgcgcaattcgacgcctctcattatgacaac
gagaaaggtgaatttggtggattcggttcagttagtggtaaaattgagatcgagatcaag
atcaaccacgaaggtgaggtcaacagagcgcgattcatgccgcaaaacccgtgcgtgatc
gcgacgaagaccccctcgagcgacgtgctcgtgtttgattatactaagcatccaagcaaa
ccggatcccaacggcgaatgccatccggatttgagattgcgaggacatcaaaaggaaggc
tacggactctcatggaatccgaatctcaacggatacttacttagcgcgtctgacgatcac
actatctgcctgtgggatatcaatgccacgccgaaggaaaatcgtgttatcgacgcgaaa
actatcttcacaggacacacagctgtggtcgaagatgtcgcttggcatctgttacatgaa
tcactatttggttcggtcgctgacgatcaaaagctcatgatctgggacaccagatgcaac
aatactagtaaaccaagtcataccgttgatgctcacaccgctgaagtgaactgcctgagt
ttcaatccatactctgaatttatattagctactggcagcgcggataaaactgtagctctt
tgggatctgcgaaatctcaaattgaagttgcattcatttgaatcacacaaggatgagatc
ttccaggtccaatggtcaccacacaacgaaacgatattggcgagcagtggcacagacaga
cgattacatgtctgggatcttagcaagatcggcgaggagcagtccagcgaggatgccgaa
gacgggccacctgaacttttgtttatacatggaggtcataccgcgaaaattagtgatttt
tcgtggaatcctaatgaaccgtgggtcatatgctcggtgtcggaagataacataatgcaa
gtatggcaaatggcggagaatatttataacgatgaagaacctgaaacacccggaagcgag
attgaaactggcggctcataa
DBGET
integrated database retrieval system
