Vollenhovia emeryi: 105559850
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Entry
105559850 CDS
T06016
Name
(RefSeq) putative ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
vem
Vollenhovia emeryi
Pathway
vem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105559850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vem03019
]
105559850
03036 Chromosome and associated proteins [BR:
vem03036
]
105559850
Enzymes [BR:
vem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105559850
Messenger RNA biogenesis [BR:
vem03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105559850
mRNA degradation factors
5'-3' decay
Decapping complex
105559850
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105559850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
105559850
NCBI-ProteinID:
XP_011863849
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MMTETHMNSNHMLNSGLSNKSEIEKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPR
KDVIQALVIVPTRELALQTSQICIELAKHMDIKVMVTTGGTNLRDDIMRIYQKVQVIIAT
PGRILDLMDKNVANMEHCKILVLDEADKLLSQDFKGMLDHVISRLPQERQILLYSATFPL
TVKQFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
VIDPSLYVARPEDNNSMEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgagacgcatatgaactccaatcatatgttgaattctggtttgtctaacaaa
tcagagatagaaaaaatggatgatgtgggatggaaagccaaattaaaaattccaccaaag
gataaaagaataaaaacaagtgatgttaccgacacacgtggtaacgagtttgaagagttt
tgcctaaaacgtgaattactcatgggaattttcgaaaagggatgggagaagccatcaccg
atccaagaagctagtattcccattgcactttctggtaaggacatcttggcacgagcgaaa
aatggaactggtaaaactggagcgtactcaattccagtgctggaacaggttgacccaagg
aaggacgtaatccaagcactggtaattgtgcctacaagagagttagccctacaaacatcg
caaatttgtatcgaacttgcaaagcacatggatataaaagttatggttacaactggagga
actaacttacgagacgacattatgaggatttatcaaaaagtacaagtgataatcgcgacg
ccaggaaggatccttgatctgatggataagaatgtggcaaatatggagcactgtaaaatt
ctagttttggacgaagcagacaaactgctgtcgcaagacttcaagggaatgttggatcac
gtaatatcgagattaccacaggaacgtcagattttgctgtattcagctacgtttcctctg
actgtgaaacaatttatggaaaaacacttgaaagatccatatgagattaatttaatggaa
gagttgactttgaaaggcgtaacacaatattacgcttttgtacaggaacgacaaaaagtt
cactgccttaacacgctattctccaagctacaaataacgcaaagcataatcttctgtaat
tcaacgcaacgcgtcgaattgctggctaagaaaataacagaccttggatattgctgttat
tatatacacgcgaaaatggcgcaggcacaccgaaatcgcgtattccatgatttccgtgca
ggattatgccgaaatctcgtaagcagtgatctatttactcgcggtattgatgttcaagct
gtgaacgtcgtaatcaattttgactttccgaagatggcagagacatatctgcatcgaatc
ggccgatctggaagattcggccacttaggtatagcaattaacctaatcacgtatgaagat
cgcttcaacctacaccgtatcgaacaagagcttggaacagaaattaaacctatcccaaag
gtgatagaccccagtttgtacgtggcgagaccagaagacaataatagtatggaagaaggc
aacgtgtccaagtag
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