KEGG   Vollenhovia emeryi: 105559905
Entry
105559905         CDS       T06016                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
vem  Vollenhovia emeryi
Pathway
vem04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105559905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vem04121]
    105559905
Enzymes [BR:vem01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105559905
Ubiquitin system [BR:vem04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105559905
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     105559905
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C zf-C3HC4_2 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_DCAF4 zf-C3HC4 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N zf-RING_2 WD40_like Beta-prop_DCAF12 zf-C3HC4_3 zf-RING_UBOX Beta-prop_CAF1B_HIR1 zf-RING_5 RING_XB3-XBAT31 Beta-prop_WDR75_1st Beta-prop_Vps41 WD40_RFWD3 zf-C3HC4_4 Beta-prop_IFT140_1st zf-RING_10 Beta-prop_SCAP WDR54 zf-RING_6 KIF21A PUMA_CC U-box zf-ANAPC11 TRAF3_RING zf-rbx1 CCDC93_CC
Other DBs
NCBI-GeneID: 105559905
NCBI-ProteinID: XP_011863939
LinkDB
Position
Unknown
AA seq 684 aa
MSTPGDGNMGNDSSAGSSGGLGDGSGKINKHHPPTNVLQRMTGILEDKSNDYMCPICFDL
IDTAYITRCGHTFCHHCIAKCLEIKDRCPKCSFTLSEQDIFPNFLLDELVSKYKTRTKGL
AQLGSYADNGRHRAAGNDLSVPASDGWRSIVAAESANLTLPDVNVMLEVLTQRKHLLEAE
TCTAQNKLLHEFLKHLLQQKEEQRNQLQKEVALIKKDMEEVENILKDVQSKCPRVEDVKK
ASENDTAQVSAIRREMLGLLDIIDSNMVKPSDKTATGVTDAFVSPNVAQPGGSTLATRRK
RLHAHFDDFVQCYFDSRGKELLLGQKSQFQSEAQHGGVHSTSSGLDIFRENLVKFSRYNS
LRPLATLNYSSDLFNNSTIVSSIEFDKDNEFFAIAGVTKRIKVFDYGAVIRDTVDIHYPS
IEMVSSSKISCVSWNSFHKGMLASSDYEGTVTVWDATTGQRTKTFQEHEKRCWSVDFNDV
DTRLIASGSDDARVKLWALNTDYSVASLEAKANVCCVKFNPRSSCHLAFGSADHCVHYYD
LRNMKEALCIFKGHRKAVSYVKFINKEEIVSASTDSQLKMWNINNPLCLRSFVGHVNEKN
FVGLATDGDYVACGSENNALYVYYKGLTKQLFSYKFDAVRSILEVQDRREEDLNEFVSAV
CWRQMSNVVVAANSQGIIKILELI
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgtcgactcctggcgacggtaatatgggcaacgatagcagcgcggggagcagtggtgga
ttaggcgacggtagcggtaaaattaataagcatcatccgcctacgaacgtgctacagagg
atgaccgggatattagaggataagagcaacgattacatgtgcccgatctgcttcgatctc
atcgacacggcgtacatcacacgctgcgggcacaccttctgtcaccactgtatcgccaag
tgcttagagattaaggaccgctgcccgaagtgcagcttcacgctcagcgaacaggacatt
tttccgaattttctgctggacgagctggtttccaagtacaaaacgagaaccaagggcctg
gcccagctgggctcctacgcggacaacgggaggcacagggcggcgggtaacgacttgtcc
gtgcccgcgtccgacggttggcgtagcatcgtggcggcggagagcgccaacctcactctg
cccgacgtgaacgtcatgctcgaggtgctgacccagcggaagcacctgctcgaggcggag
acctgcacggcgcagaacaagctcctgcacgagttcctcaagcacctgctgcagcagaag
gaggagcagcgcaaccagctgcagaaggaggtggcgctgatcaagaaggacatggaggag
gtggagaacattctcaaggacgtgcagagcaagtgcccgcgggtcgaggacgtgaagaaa
gcgagcgagaacgacaccgcccaggtgtcggccatcaggcgggagatgctcggcctcttg
gatattatagactcgaatatggtgaaacctagcgacaaaacggccaccggcgttaccgac
gctttcgtcagtccgaacgtcgcgcagcccggcggctcgaccctggccacacgcaggaaa
cggctgcacgcccactttgacgacttcgttcaatgttacttcgactcgcgcggcaaggag
ttactgctcggccagaagtcgcagtttcagagcgaggctcagcatggcggcgtgcacagc
acgagttccggtctggacatctttcgcgagaaccttgtcaaattctcgaggtataattcc
ctgcggccgctggcaactctcaactactcgtcggatctcttcaacaactccacaatcgtg
tccagtatcgagttcgacaaagacaacgaattcttcgcgatcgccggtgtcactaagcgt
atcaaggtgttcgattacggcgccgttatacgggacactgtcgacattcactatccctcc
atcgagatggtctctagttcgaagatctcgtgtgtctcctggaattcttttcacaagggc
atgcttgcctcttcggattacgagggtacggtgacggtgtgggacgcgacgaccggtcaa
aggacaaagaccttccaagagcacgagaagaggtgttggtctgtggatttcaacgacgtc
gacaccagattgatcgcgtccggctccgacgacgcccgggtcaagttgtgggcgttgaac
acagattactccgtagcgtcgttggaagcgaaggcaaacgtgtgttgtgtgaaatttaat
cctcgcagctcatgtcacctggcgtttggttcggcggatcactgtgtacattattacgat
ttgcgcaacatgaaggaggcgttgtgcatattcaagggccaccgcaaggccgtatcctac
gtcaagttcatcaacaaggaggaaattgtgtcggccagtacggattcccagctgaagatg
tggaatataaacaatccgctttgcctccgatcgttcgtcggtcacgtgaatgagaaaaat
tttgtcggactcgccactgacggcgattatgtggcctgcgggtcggaaaacaacgcgctc
tacgtatactacaaaggactgacgaagcagctgttctcgtacaaattcgacgcggttcga
agcatattggaggtgcaggacagaagggaggaagatctgaacgagttcgtgtccgcggtg
tgctggaggcagatgtctaatgtcgtagtagccgctaactcccaagggattatcaaaata
ttagagctaatttga

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