Vollenhovia emeryi: 105560112
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Entry
105560112 CDS
T06016
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vem03009
]
105560112
Enzymes [BR:
vem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
105560112
Ribosome biogenesis [BR:
vem03009
]
Eukaryotic type
Other ribosome biogenesis factors
105560112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
FtsJ
Fibrillarin
TRM5-TYW2_MTfase
Eapp_C
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
105560112
NCBI-ProteinID:
XP_011864315
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MSNEFVHSVAVPRIYKITADIVRRVREDGASLKSLIYEKKHPNVAGIHALSVNTLRALPQ
LDLLLDKTEILTEQPRLNPWLARVLITELLWRKRCLKSRSKPVLTVLAYEKRLREESKNL
GCIETLAVDKEKGQKPRYVRINTLLLSVEKAISLFQEDGWQLLPKSTTYSSYLQSLSQLS
KPHFIQDLHIPEMLVFPPSTPFHKHSSYENGELILQDKASCLPVHLLDPVSGSVVLDMCA
APGMKATYVAAKLQNYGQVYAVEIDAKRFETLLSQIRKTRSSCVEALNQDALTLDPKQYS
HVEYILVDPTCSGSGIADRPKQSDVDGKPELQRLRNLQSFQVYLLRYAMFNFPNVKRIIY
STCSLHPEENEQVVDEVLADIGGAYRLVPVGQLLKNNWTNFSSKKYNCGDTCLYSKPDDD
YCNGFFVAVFDRNFDVTLPKCKHKGGNEYRSCFEANLNVEKDETAAYKNGEEEKKKRRKR
KEEISTNVDEQGKMSVIPEMTSNFNDRLASNESEGVKEKMLKKMKVKKSKRKNTLEVEIN
NDKSKTEYDEEEQNKKIDSQPSKIKEEKVNEETVIVISKKRKRNKKN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgaattcgtgcattccgttgcggtcccacgtatttacaaaatcacggccgac
atcgtgcgtcgcgtgcgtgaggatggtgccagtctgaaaagtctcatttacgaaaagaag
catcccaacgtggccggcatacacgctctctcggtgaatactctacgagcgctacctcag
ttagacttgcttctcgacaagaccgaaattctaacggaacaaccgcgtttgaatccctgg
ctagccagagttctcataacggagcttctgtggcgcaagagatgcctcaagagccgctcc
aagccagtcttaaccgttttagcttacgagaagagactgcgagaggaatcaaagaacctt
ggctgcatagagactctcgccgttgacaaggagaaagggcaaaagcctagatatgtccgc
atcaatactcttctgttatcagtggaaaaggccatctctctcttccaggaagatggatgg
caattactacccaaaagtacaacatattcttcatatctacaatccttgtcgcagttatct
aaaccgcattttatacaagatctacatatacctgaaatgttggtttttccgccctcaaca
ccctttcacaaacacagcagctatgaaaatggcgagcttattcttcaagataaggccagc
tgtttgccggtacacttgttagatcctgttagtggttcagtagtgctggacatgtgcgcc
gcacccggcatgaaggctacgtatgtggcagcaaaattgcaaaattacggtcaagtttat
gccgtggagattgatgccaagagatttgaaaccttattgagtcagataagaaagactcgt
tcctcctgcgtggaagcccttaatcaagatgccctgactctcgatccaaagcaatattca
cacgtggaatacattctagtcgatccgacttgttctgggtcaggcattgccgacagacca
aaacagagtgacgtggatggaaaacccgaattacaacgcttacgcaatctacaatcgttc
caagtttatcttcttagatacgccatgttcaactttccaaatgtaaaaagaatcatctac
agcacttgttctttacatcccgaggaaaatgagcaagtagtagacgaagttctcgccgat
attggtggcgcttatcgtttggtaccagttggacaattgcttaaaaataactggacaaac
tttagctcgaaaaaatacaactgcggggatacatgcttatattccaagccagatgatgat
tattgcaatggtttcttcgtagcggtattcgacaggaattttgacgtgactctgccaaag
tgcaaacataaagggggcaacgagtatagaagttgtttcgaagctaacttgaatgtcgag
aaagatgaaacagctgcgtacaagaacggagaggaagagaagaagaagaggaggaagagg
aaagaagaaatttcaacgaatgtcgatgaacaaggaaagatgtctgtaattcccgaaatg
acaagtaattttaatgatagattggcatcaaatgaatcagaaggtgtgaaagagaaaatg
ttgaaaaagatgaaagtgaaaaaatcaaagcgtaaaaatacactcgaggtagaaataaat
aatgacaagtcgaaaactgaatatgacgaggaagaacaaaataagaaaattgacagtcaa
ccgtcgaagataaaagaggaaaaggtaaatgaagaaactgtaattgtaatatcgaagaag
agaaaaagaaataaaaagaattga
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