Vollenhovia emeryi: 105560602
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Entry
105560602 CDS
T06016
Name
(RefSeq) trithorax group protein osa isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
vem
Vollenhovia emeryi
Pathway
vem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105560602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vem03000
]
105560602
03021 Transcription machinery [BR:
vem03021
]
105560602
03036 Chromosome and associated proteins [BR:
vem03036
]
105560602
Transcription factors [BR:
vem03000
]
Eukaryotic type
Helix-turn-helix
ARID
105560602
Transcription machinery [BR:
vem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105560602
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105560602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
105560602
NCBI-ProteinID:
XP_011865237
LinkDB
All DBs
Position
Unknown
AA seq
2163 aa
AA seq
DB search
MAATQAESQQNDVKLNESVKCAQKRTQVGGNSASASAKQQLDSEPDDKVSRGAAQLLKYV
NRGGDTTGYDMSQYREDIGGHTAAGEVKSPREVGQPVQEPVGKQETHDAPGHPGHPGHPY
APNVIRDYPDEYSNNKSGEFAAAKSLADYPPGKQLPDYVAKHTDFPAKQLDYHGKHLMHD
TERTHRAEMEEHYSTSKIESRLYVGAGAPNFSGQQRFLSGQGMSQTAGPTPTLNQLLQAS
TPVHRFHGNYPGMGPDYQQPWPMQRPPVVPPVYPQSGQRPPQTGSPRLHTGPGAQSSPTP
MQYQQYTQRYSSPTRPHAPYSHHQLNSYTTQTSHPSSLYTEQRGWNQGGPPNPPPPPSNQ
VTPSGQSPQRALSQSPAPPPAASPQPQATGQSQAFHNMQQRATTPNTQGIDSGELSGQNS
NDSSNGPACPGTPNSQGMRPTPSPTGSTGSRSMSPAVDRPAQDIPETRERSFAFSNRLLP
GKEVTPRANLPTDLGCPAQHAQCQQNVQMPPRPSSSQSDGSGPAPRMSHSPMTTQGGYQQ
PLGPSPHMHSYKMNSTGPGVVQPGPGSTALGGISPMGGGMGYAAGGTAAGQPGGYHAQST
YAPPRPHMQFPQGYPTPANSQPPPNNQYQPPNRPNNLVQYPPYAHKMGFNSVPPGMPPSP
GPPQVYGAGGTTTMVPPGTPGVPVIGNMGPPASSMGPPPPSPNHISNQPPPPTSSAVPHL
HTPAATPPLNHEGSPMPPPSTTPNSHPASAPTPTSHNSADLTAETSNDSGITTTASGTSA
INVISTSSGTVTSVITTGPDGTSLDEGSQQSTLSNASAASGEDPAFTPKVRKEMIGGYHS
HPATPQSTVPSPGAASINSIHEEYSDMNSPGWPRTPASPVFNSHVPQDPYRSKKTDSLAK
LYEMDDSIERRTWLDKLVNFMEERRSPITSCPTISKNPLDLFRLYLYVKERGGFMEVCKV
TKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQPIINQVEAGSKK
KGSKGTASVPSPGSSNSQDSFPAAGSSNASMDGYGSYQGSYAGGTPGGPSSEYTPPPPRP
PSQSSAPSAHQGIQQGSYQNTGSYQNYPQEQYIRPQGNALSQQGEFSQPYSPRSHYPPYV
PDVDRGYPGGNMPPNNATGQDMYNRYTGGQQGPASYPTGTPPNARSNSYPAGPQAHPAAV
QQQTATSQPSSPSQPPTVSSYSCPQDYYRQEQSGYGAPGGTQIYTASGAANKNMPPPPPG
PTQPRRHPDFAKDQQYPQYNQQRPAYPGWPNTSNQYNSNSGNNRVQYPSQQAPSPSQQPQ
PPQPQQGVTQVVTPAPTAPAVVGGMPSSQQWASQQSNRPAPQPSLNTIPHPPPPWDHRYT
NQPSPLYPAPGSHQNQLGVNPMISQQPTSKREMTFPPDSVEAITPLLYKRRKLTRPDVAP
VEAWRIMMALRSGLLAESCWALDVLNILLFDDSSVSYFGLTHLPGLLDVLLEHFSRSLSD
MFESCVNDDDRYCQAADGPEVDLGAVTRPIDSEDRTKLLSTSNYTYLSRRGRPVKIVSRD
DDLFVLDTRRPWDHQECESETEPWQVDTNATKYIVTCFQSEMGSVPFARLLRDEKPPLLQ
KEVDSTDLKDEAKADSVSGVHETLDFSHKSGELCDKQSSKDSGERKQQQQLDKKKKTKTL
SDVLSRIKKEPVEMNDLTRELFEKKNDGFKKDCDSEVTKANNNMGEHFGSDVSKNDEDSL
PTQNGLNESTAATTATVTTTATATATAITTATAAASNIDNAVDKNVEIKTETTEENELGT
TRDDKEGPRLNVRDPAGTLKRRRISDYEDESYSRDEASLYLVTETQDNLARRCVCLSTIL
RNLTFIPGNEAEFAKNVTFLSLLGKLLLLHHEHPVRAQKTRNYDREEDADFADSCSSLQG
EGEWWWDFLHHVRENVLVMAANISGHMDLSQHPEEISRPVLDGLLHWAVCPAAHGQDPFP
TVGPNSSLSPQRLALEALCKLCVTECNVDLVVATPPYSRLQRLCSVLTRLLCRSEEQVLR
EFGVNLLHFLSAADSGVARTIALQTPCVALLVAFIEQAETSALGVANQHGLAALRENPES
MGTSLDMLRRAAGTLLNLARHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVLFQCS
RGT
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcaagccgagagccaacaaaacgatgtgaagctgaacgagtccgtgaaa
tgcgcacagaagcgtacgcaagtcggtgggaatagtgcgagtgctagtgcgaagcagcag
ctggattccgagccggacgataaagtgtcccggggcgcggcccagctgcttaaatatgtg
aatcgcggcggggacacgacgggctacgacatgagtcaataccgcgaggacattggcgga
cacactgccgccggtgaggtaaaatcgccgcgcgaggtcggccagccggtccaggagccc
gtcggcaagcaggagacgcacgacgcgcccggccacccgggccacccgggccacccgtac
gcgccaaacgtgatacgcgactacccggacgagtacagcaacaacaagtccggcgagttc
gccgcggccaagtcgctcgccgactacccgcccggcaagcagctcccggactacgtcgcc
aagcacacggacttccccgccaagcagctcgactatcatggtaaacacttgatgcacgac
accgagcggacccaccgggccgagatggaggagcactactccacctccaagatcgagtcg
aggctctacgtcggtgccggcgcaccaaacttctccggccagcagaggttcctctcgggc
cagggtatgtcccagaccgccggccccacgcctaccctcaaccagttgctgcaggcgtcc
acgccggtccatcggtttcacggcaattacccgggaatggggcccgactatcagcagccg
tggcccatgcagaggccgccggtcgtgcccccggtttatccccagtccggccagcgtcct
ccgcagacgggctcgccgagattacacacggggccaggggcccagagttctccgacaccc
atgcaatatcaacagtacacccagcgatattcctctcctacgagaccgcacgcgccctac
agtcatcatcagctaaactcttatacgacgcaaaccagtcatccctcaagcctgtacacg
gaacaaagggggtggaaccaaggcggtccgccgaatccgcctccaccgccgagtaatcag
gtcaccccgtcgggtcagtcgccacagcgtgctttgtctcagtccccggctccgccgcct
gctgcgtcaccgcagccgcaggccaccggccagtcccaggctttccacaatatgcagcag
cgagctacaacaccaaatactcaaggaattgactctggggagctatcaggacagaatagt
aacgacagttcgaatggaccagcctgcccagggacaccgaactctcaggggatgagacct
accccgtcacctacaggatccacaggttctcgctcgatgtcccctgctgttgatcgccct
gcgcaggatatcccagagacgcgggagcgctctttcgcattctcgaatcgactcctccct
gggaaggaagtcacgcctcgcgctaaccttccgacggatctgggatgtcctgcgcagcac
gctcaatgccaacaaaacgttcagatgcctccacgtccgtcgagtagccagtcggatggt
agtggaccagcaccgcgcatgagtcactctcctatgaccactcagggcggttaccagcaa
ccattgggtccttcgccacacatgcacagctacaaaatgaacagcactggtcctggtgta
gtccaaccgggacccggctcgacggctctcggtgggatcagcccgatgggtggtgggatg
ggctacgcggccggcggaactgccgcgggtcagcccggaggttatcatgcgcagtccacg
tacgcgcctccgcgtcctcacatgcagtttccgcaggggtatccgacgccggcaaactcg
caaccaccacccaacaatcagtatcagcctcccaacagacccaacaacttggtacaatat
ccaccgtacgcgcataaaatgggcttcaacagcgtgccaccgggaatgccaccgagtccg
ggaccgccgcaggtttacggcgctggcggcacgaccacgatggtaccaccgggtaccccc
ggtgtgcccgtcatcggtaacatgggaccgccggcgagctccatgggcccgccaccaccg
tctcctaatcacataagtaaccagccgccaccgcccaccagctcggcggtgccgcactta
cacacgccggcggccacgccgcccctcaatcacgagggcagcccgatgccaccgccgagc
acaacaccgaactcgcaccccgcgtcggcgccgacacccaccagtcacaattccgcggat
ctcacggctgagacttccaacgacagcggtataaccacgaccgcatcaggtacgtcagct
ataaatgtcatatctacttcgagtggtactgtgacgtctgtaataacaacaggtccagac
ggcacgtctctggatgaaggttcgcagcagtcgacgttatctaacgcatcggctgcctct
ggtgaagatccagcgtttacaccaaaagtgcggaaggagatgatagggggataccacagc
catcctgcgacaccgcagagcactgtcccgtctcctggcgctgctagcattaattcgatt
cacgaggaatattccgacatgaacagtcctggttggccgcgtactcctgctagtcctgtg
tttaacagtcatgtgcctcaagacccgtacagatctaagaagacagatagtctggcaaag
ttatacgaaatggacgactcgatagaacgaagaacctggctggacaagctggtcaacttt
atggaagagcgaagatcaccgatcaccagttgtcctaccatctccaagaaccccctcgac
ctatttcggctttacctctacgtgaaggagagggggggcttcatggaggtatgcaaggtg
acgaaaaacaagacgtggaaggatatagccggcctgttgggcatcggtgcgagcagtagc
gctgcttacacactgcgcaagcactacacgaagcacctgctggcatacgagtgccacttt
gatcgcgggggtgtggacccgcagcccatcatcaatcaggtcgaggcgggctcgaagaag
aagggatccaagggaactgcttccgtaccatcgccgggttcttccaattcccaagattcc
tttcccgctgctggatcgagcaacgcttccatggacggctatggaagctaccagggtagt
tacgcgggcggcacacccggtggcccgtcgtcggagtacacgccgccgccgcccaggcca
cccagtcaaagcagcgcaccctccgcccatcaagggatacagcagggtagttaccagaac
acgggctcctaccagaactatccgcaagagcagtacattcggccgcagggaaacgcgctg
tctcagcaaggggagttcagtcaaccgtactcgcctagatcgcattaccctccatacgta
ccggatgtcgacaggggatacccgggtggtaacatgccgccgaacaacgctactggacag
gacatgtacaacagatacaccggcggtcagcaaggtcccgctagctatcccacgggaacg
cctcctaacgcgcggagcaacagctacccggcgggaccgcaggctcatccggctgctgtg
caacagcagacggcgaccagccagccttcctcgccctcgcaaccgccgaccgtgtcgtcg
tactcgtgtccgcaagactactatcgacaggaacaaagtggatacggagcgcccggtgga
actcaaatatacactgcgagcggagcggctaacaagaacatgccgccgccccctccgggg
cccactcaacccagacgccacccagactttgccaaagaccaacagtatccccagtataat
cagcaacgaccggcgtatccaggatggccaaatacatctaatcagtacaatagtaatagt
ggaaacaacagggttcagtacccgagccagcaggcgccgtcgccatcgcagcaaccgcaa
ccgccgcagccgcaacaaggagtcacccaagtcgtcacccctgccccgaccgctccagcg
gtggtcggcggtatgcctagtagtcaacaatgggccagccagcaatcgaacaggcccgca
ccccaaccgtctctcaacactataccgcatccgcctccaccgtgggatcatcgctacacg
aatcaaccgtcccctttgtatccagcacccgggagtcatcagaaccagctcggagtgaat
cccatgatcagccagcaaccgacgtcaaagagagaaatgacattccctcctgacagcgta
gaagcgatcacgcctcttttgtacaagcgacgaaaactgacgcgccctgacgtggcgcca
gtggaagcttggcgcatcatgatggctttgagatcgggtctactcgccgagagctgctgg
gccctcgacgtattaaacattttattattcgatgactcttctgtaagttatttcggattg
acacacctacccggactactggatgttctactcgaacacttctcgcgttctctctccgac
atgttcgaatcatgtgtaaacgacgacgatcgctattgccaggccgcagatggtccggag
gtagacctcggcgcggtgacgcgcccgatcgattcggaagaccggacgaaattgctgtct
acatcgaattatacgtatctctcgaggagaggacgccccgtcaagatcgtctctcgggac
gacgatctgttcgttctggacacgcggaggccttgggatcatcaggagtgcgagtcggaa
accgagccgtggcaagtcgacacaaacgcgaccaaatatatcgtcacgtgttttcagtct
gaaatgggctcggtgcctttcgcccgtttgctaagggacgagaaaccgcctctgttgcaa
aaggaagtcgacagcacggatttgaaggacgaagccaaagcggacagcgtcagtggtgtc
cacgagacgcttgacttttcccacaagtccggcgagctctgcgacaagcaatctagcaag
gatagtggcgagcgcaagcaacagcaacaactagacaagaagaagaagacaaagactctg
agcgacgtgctgtcgaggatcaagaaggaacccgtagagatgaacgatctcacgagggag
ctgtttgagaagaagaacgacggcttcaagaaagattgcgacagcgaggtgacgaaagca
aacaacaatatgggcgagcactttggcagtgatgtgtcaaagaacgatgaggactcgttg
ccgacgcagaatggactgaatgaatcaacggcagcgacgacagcgacggtgacgacgaca
gcgacagcgacagcgacagcgataacgacagcaacggcggcggcaagcaacatcgacaac
gccgtagacaaaaatgtcgagatcaagacggaaacgacggaagagaacgaactgggaacg
accagagacgacaaggagggaccaagattaaacgtaagagatccggcaggaacactaaag
cgacggaggataagcgactacgaggacgagagctactcgagggacgaggcgagtctctac
ctggtgacggagacgcaggacaacctggcccgtcgttgcgtgtgcctgtcgacgatcctg
aggaatctcaccttcatccccggcaacgaggcggaattcgcaaagaacgtgacgttcctc
agtctactcggcaagctgttgttgctgcaccacgagcacccggtacgggcgcaaaagacg
cgcaattacgaccgcgaggaggacgcggactttgcggactcgtgtagcagtttacagggc
gagggcgagtggtggtgggacttcctccatcacgtgagggagaacgttctcgtgatggcc
gccaacatatccggccacatggacctgagccagcatccggaggagatctcgcggccggtg
ctcgacggcctcctgcactgggccgtgtgcccggccgcccacggtcaggaccccttcccg
acggtcggccccaattcctccctgtcgccgcagagactcgcgctcgaggcgctgtgcaag
ttatgcgtgaccgagtgcaacgtcgacttggtggtggcgacgccgccgtattcccgcttg
cagagactatgctcggtgctgaccaggctcctctgccgcagcgaggagcaggtgctgcgc
gagttcggcgtgaatctgctgcacttcctctcggcggcggacagcggcgtcgcgcgcacc
atcgccctacagacgccctgcgtcgcgctgctcgtcgcgttcatcgagcaggccgagacc
agcgcactcggcgtcgctaatcagcacggtctcgccgctctgcgcgagaatcccgaatcg
atgggcaccagcctcgacatgctgcgacgcgcggccggcacgctgctcaacctcgcaagg
catccggacaaccgaactctcctcctgcaacacgagtcccgcctgctcgccctggtcatg
agccagatcctggatcagcaggtcgccgcgatagtcgcgcgtgtgttgttccagtgttcg
aggggtacgtaa
DBGET
integrated database retrieval system
