Vollenhovia emeryi: 105560776
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Entry
105560776 CDS
T06016
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vem03036
]
105560776
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105560776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
fvmRadSAM-pep
DEAD
Motif
Other DBs
NCBI-GeneID:
105560776
NCBI-ProteinID:
XP_011865564
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MATKKYDDGVSDDTSGSDFDDEEDPDKIEVPGGGKDLATAAVIGSIKDEKSADLQSSLDN
LGSLEKTQGALNELNQKFGNKIPGGLVMKAAGPGYEMVRVGGSQGQTPPGFVGAGQLNQL
NQQLAAGYPAFPPGLPLTGFNPAAFLQSSMDMNAFMGSFMGVPGMNMGVNPFVQFLNQTG
ISPNWSGLSGKAVSQMWMNSGDPTKLMQPNIPEEEEVDDEDMGVAETYADYMPPKLKLGR
KHPDPVVETASLSSVEPTDVWYKLSIPEETIRTGALSALQLESITYAAQQHEHLLPDGTR
AGFLIGDGAGVGKGRTIAGIIFENYLKGRKRAIWVSVSNDLKYDAERDLKDIGASKIEVH
PLNKFKYAKISSAVNGNVKKGVIFSTYSALIGESSQSGGKYKSRLKQLLQWCSEDFDGLI
IFDECHRAKNLCPTGSSKPTKTGLTVLELQNKLPKSRVVYASATGASEPRNMAYMVRLGM
WGEGTPFPEFNGFITAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVAFKIEEVPLSKD
FTKVYDHSVRLWVEAMQRFHEAAELIDAENRMKKTMWGQFWSAHQRFFKYLCIAAKVKHA
VAVAREAVKCGKCVVIGLQSTGEARTLEQLERDDGELSDFVSTAKGVLQTLVEKHFPAPD
RNRIQRLLGLEPPKFKLEDDDMDGAGGSAGGSKRKPVRQAAQRATKKVRSWSSEEEISDE
ERNGAHSSGSEYKLSGTESEDDHHTDEESNVSSDFNPFFSDSDSDVDPWDRRKKKGKKQK
KPAKKRLSTQDKIQSMLVHKQSSNKSKRNGDTAISGPMSAMSGSLPYNQAPPRDAIERAC
SMKEELLSQIEILGDRLPPNTLDQLIDELGGPENVAEMTGRKGRVVQREDGGIEYESRSE
VDVPLETLNLTEKQRFMDGEKTVAIISEAASSGISLQSDRRARNQMRRVHITLELPWSAD
RAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFASIVAKRLESLGALTHGDRRATETRDL
SQFNIDNKYGRAALEATMKTIMGYEPPLVPPPQDYHGDFFKDVADALVGVGLICNTENTP
GVLTLDKDYNNMSKFLNRILGMPVDLQNRLFKYFTDTLNAIVTQAKKTGRFDMGILDLGT
SGENVRRVRLYRFLRKHATGKAPTELHVVHVERGMSWSEVTDKFAELTGSKEGFYLSHQI
RNGKQTAILAVVVDSSKKKSEGKKDQLYMIYRPNTGLQLRQESLGELEKKYKKVSTDEAE
PHWTQQYEASVNTCSHAYWSGNCKNSTIGIDCEVGLRRRSYNVLAGSVLSVWSRVENVLA
TRSGHNSKMQVIRLRTDEGLKIVGTLIPKSCMEPLRQALSSDAEKVEEQTF
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaagaagtatgacgacggagtgagcgatgacaccagcgggagtgactttgac
gacgaagaggatcccgataaaattgaagtgcctggtggcggcaaagatctcgcgaccgcc
gctgtgattggaagcatcaaagatgagaagtccgcggacctgcagagctctttggataac
cttggatctttggagaaaacgcagggggcgttaaacgaattgaaccaaaaattcggcaac
aaaattcccggagggttggtgatgaaggccgcagggccgggttacgaaatggtgcgcgtc
ggtggctctcagggacaaaccccgccaggttttgtcggcgccggtcagttgaatcaactg
aatcagcaactagcggctggatatcccgcttttccaccaggactgcctcttacaggattc
aaccctgccgcgtttcttcaatcaagcatggacatgaacgcttttatgggtagtttcatg
ggtgtgcctggaatgaacatgggggttaatcctttcgtgcagtttcttaatcaaactgga
ataagccccaattggtctgggctgtcagggaaagcagtgtcgcaaatgtggatgaattcg
ggcgatccgacaaagttgatgcaaccaaatattccggaagaggaagaggtggacgacgag
gacatgggtgtcgccgagacttacgccgattatatgccgccaaaacttaaacttggacga
aagcatccggatccagttgtggaaactgcgtctttgtcgagcgtcgagccgacggacgtc
tggtataagctctccataccggaggagacgatacgaaccggcgcgctctccgcgcttcag
ctcgagtccatcacgtacgctgctcaacagcacgagcacctcctgcccgacggcacacgc
gccggctttctgatcggcgacggcgcgggcgttggtaagggcaggactatagccggtatt
atatttgagaattacttgaaaggtcgaaaacgtgccatctgggtgtcggtgtcgaacgat
ctgaaatacgacgccgagcgcgatttgaaggacataggtgcatcgaaaatagaagtacac
cctttgaataaatttaagtacgcgaaaatctcgtcagccgtgaacggtaatgtgaagaag
ggtgtgatcttcagcacgtactccgcattaattggcgagtcgtcgcagagcggcggtaaa
tataagagccgactgaagcagctgttgcaatggtgcagcgaagatttcgacggtctgata
attttcgacgagtgtcatcgagcgaagaatctgtgccccaccggaagttcaaaacctact
aagacaggattaacagtcttggagctgcagaacaagcttccgaagtctagggtcgtatac
gccagcgcaaccggcgcctccgaaccccgcaatatggcctacatggtacgactgggtatg
tggggtgagggcacgcctttcccggagttcaatggctttatcactgccgtggagaagcgc
ggagtcggcgcgatggagatcgtagcgatggacatgaagctgcgcggcatgtatatcgct
cggcaattgagttttcacggtgttgccttcaagatcgaggaagtgccgctttccaaggat
tttaccaaggtctacgatcattcggtgcgactgtgggtggaagcgatgcagaggttccac
gaagcggcggagctaatagacgccgagaatcgtatgaagaagacaatgtggggccaattc
tggtcggcgcatcagcgtttcttcaagtatctctgtatcgccgcgaaggtgaagcacgcg
gtggccgttgcccgcgaggcggtcaaatgtggtaaatgcgtggtgatcggcctgcagtct
accggcgaggcgcgcaccttggaacagctggaacgtgacgacggcgagctcagcgacttc
gtttctaccgcaaagggagttttacaaacgctggtggagaaacactttccagcgccggat
cgtaatcgcatccagcgcctcctcggtctagagccgccgaagttcaagttagaggatgac
gatatggacggtgccggcggttctgcgggaggcagcaagaggaagccggtccgtcaagcg
gcgcagcgtgcgacgaagaaggtgcgctcctggtcgtcggaagaggagatctcggacgag
gaaaggaacggcgctcacagttctggctcagagtacaaattaagtggcactgagagcgag
gacgatcatcacacggacgaggagagcaacgtcagctccgatttcaatccgttcttcagc
gacagcgattccgacgtcgatccctgggacaggcggaagaaaaagggcaagaagcagaag
aaacccgcgaagaagcgtctgagcacgcaggataaaatccagtcgatgctggtgcacaaa
cagtccagcaataaaagtaaacgcaatggcgacacggcgatcagcgggccgatgagcgcc
atgagcggaagtctgccttataatcaggcaccgcctagagacgctatcgagagggcctgc
agcatgaaggaagaattgttgtcgcaaatagagattcttggcgatcggttgccaccaaac
acgctagaccaattgatagacgaactcggtgggccggaaaacgtcgcggagatgactggt
aggaagggccgcgtcgtgcaaagggaagacggtggaatagagtacgagtccaggtctgag
gtggacgttcctttagaaactctcaatttaacggagaagcaaaggtttatggatggcgag
aagactgtagcgataatctccgaagcggccagtagcggtatatcgttacaaagcgacagg
cgagctagaaatcaaatgcgacgtgtgcatatcacgctcgagctgccgtggagcgcggac
agagcgatacagcagttcggacggacgcatcggtcgaatcaggtcaacgcgccggagtac
atatttcttatatcggacttggccggggagaggcggttcgcctcgatcgtcgcgaagcgt
ctggagagtctgggcgcgttaacgcacggcgatcgtcgcgcgacggagacacgagatctc
tcgcagttcaatatcgacaacaagtacggtcgcgcggctctggaagcgacgatgaagacc
atcatggggtacgagccgccgttggtgccgccgccccaggattatcacggtgacttcttc
aaggatgtcgcggacgcgctagtgggcgtgggtttgatttgcaataccgagaacacgccc
ggtgtgctgacgctcgacaaggactacaacaacatgtcgaagttcttgaatcgcatcctc
gggatgccagtcgatctgcaaaatcgtctgttcaagtacttcaccgacacgctcaacgcg
atcgtgactcaagctaagaagaccgggcgcttcgatatgggtattcttgacctaggcacc
tcgggtgagaacgtgcgcagggtaaggctttaccggtttctgaggaagcacgcaaccggc
aaggcgccgacggaactgcacgtggtccatgtcgagcgcggtatgagctggtccgaggtc
acggacaaattcgcggagctgactggatccaaggagggtttctatctgagtcatcagatc
cgcaatggcaagcagacggccattctcgcggtcgtggtggacagcagcaagaaaaaatcc
gagggcaaaaaggatcagctttatatgatatacaggcccaacacgggtctgcagctgcgg
caggagtccctgggcgaattagagaagaagtacaagaaggtgagcaccgacgaggcagag
ccgcactggacgcagcagtacgaggcctccgtaaacacgtgctcgcacgcgtattggagc
ggcaactgtaaaaactccactatcggtatagactgcgaggtggggctaagaagacgttcc
tataatgtattagccggttcagttctgagcgtttggagccgcgtggaaaacgtgctcgcc
acacgatctgggcataattctaagatgcaagttatacgactgcgtacggatgaagggttg
aagattgtcgggacgcttatcccgaagtcttgcatggagccgttacgtcaggctctctcc
tccgacgcggagaaggtggaggaacagacgttttaa
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