Vollenhovia emeryi: 105560930
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Entry
105560930 CDS
T06016
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vem03009
]
105560930
Ribosome biogenesis [BR:
vem03009
]
Eukaryotic type
90S particles
Other 90S particles
105560930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
OB_RRP5_4th
HAT_Syf1_CNRKL1_N
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
105560930
NCBI-ProteinID:
XP_011865848
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MESFPRGGKKPGTKRSATTMSKDELKPKKRKIQTKEKTVGKEKTNILNIAQQFSKQQLCQ
GYVFLGRIRDVKQLELTVSLPDGLVGSVEISDISKAYTKQLKDLLAMVKSKVPVSLTHMF
KYGDYVTCYVKTLCDSSRRDCKLSLDPELINQNISINYLAKGSKIVCSVKCIEDHGYLMD
TGIGVEAFLAYDQVEKGKQYFTGSQILCAVKNFDTIIEPSFIQLTAKKTRIDRVNSHVKS
WDVLTPGTKLLLRVTTVLSDGLRVTFGEDNVGYINQIYLSNPLSTYTVNMEVIGTLLYRQ
LLTKFAYFSLLTDESEKEMLRVGDIIERAKCLYKVVDGVVLKLSKSRGLRGYVSFLEDKS
GLCSTKFEVGSTYKCRVVSYNLLQHLYVCTTNTSALKDIYFSASDFNIGDVHDVTILDVR
PTNNYVAVSLGRVRGIVPREHISDSGINCTKQPGALHKVQARVLDIDRDKNRMKFTLKRS
LVNSQLPILQDFGEAKCGSKYHGTVSLINRNGLLVRFYGLVKGWVSRATLNPDTEHMNWN
FFIGQTVTVRVESVEKDKRRMNLTIVKEEKEKKRPVDLFVGEMVKGTVSERTYLGIYVKL
QTKDDEAAVTAFLPAAHMALCTKIGAVLTARYAPGDVINSIVFATEPTVLLTHTLVTQHK
YRNFDSLKVGDSIPSSVWEILPNGVKVVLPIDNYSKLGFVSRKCISNFEKLHVNQILFVK
IIAINSQERRLTLTMSLKAVYECLTDYEDKMTTAVGILHCYLSTQRDQEDIYEQMNKPIS
SVYLGQKVVGVVKEITENGLLFRVSDGLNCIVRKEHCIGNLKLGDSVCGTIMWKNYPHNI
LNVTLVKSIGNSITSQNMQLPELPTGVMLKAKILLVLDWFVLILVKRNGLGHLAALPVRR
HINDIAPDLAPYKIHTKIRVYVVMTKSDTGSIPICLLKSAFEVPKSTTVSKISATKTKHV
KKKKVSEPHNLANSTKKALKKNKVEEEESRIKDIDEHSESNEDSVDENETQKSKTVKRLR
LPECGFSWNDTVELAAPAETSSDDDEEPEEESERNKKKKISAAERREQERQKEREIRQRE
EALVSNQIPNSVDQFDKLVLANPDSSLLWMQYMAYHLQATEIDKARAVARQAVKKIHFMQ
FAELSNVWKAWLNLETRYGTAESLNDVFQEAVKNNDPSMYLHILTVHEDAGKKKKLKRLI
KTMTSKFKDEPNTWTKFCSALPKLDKKSRRLMRQSLNF
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttttcctcgaggtgggaagaaacctggaactaagaggtctgcaaccacgatg
tccaaggacgagcttaaacctaaaaagcgtaaaatacaaacaaaggaaaaaacggtgggc
aaagaaaaaacaaatattctcaatattgcacaacaattctctaaacaacagctatgccaa
ggatacgtattccttggccggattcgtgatgtaaaacaattagagttgacagtgtctttg
ccagatggactcgtgggatctgtggagatcagtgatatcagtaaggcgtacacaaaacag
ttgaaagacttactcgcaatggtcaagagcaaagtacccgtgtctttaacacatatgttc
aaatatggcgattatgtaacgtgctacgtcaaaactctatgtgactcgagccgaagagac
tgcaaattgtctctggacccggaattaataaatcaaaatatttctattaattatctcgca
aaaggttcaaaaattgtttgctctgtcaaatgtatagaggatcatggctatttaatggac
acaggcataggtgttgaagcatttctcgcctatgaccaagttgaaaaaggaaagcaatat
tttacaggtagtcaaatcttgtgtgcagtcaagaattttgacactataattgaaccatct
ttcatccaattgacagctaaaaagacacggattgacagggtgaactcacacgtaaaatct
tgggacgtcttaacaccgggaacaaaactgttgcttcgtgtaacaacggtgctctccgac
ggcctacgagttacgtttggggaagacaatgttggatacataaatcaaatttatctaagc
aatcctttatctacgtatacagtcaacatggaagtgattggcacgttattgtacagacaa
ctactaacgaaatttgcgtacttcagtctgctgaccgacgagtcggaaaaggagatgtta
cgcgtaggcgatattatagagagagccaaatgtctctacaaagtagtcgatggagtagtc
ctcaagttatctaaatctcgtggtctacgtggatatgtctctttcctcgaggacaagtct
ggtttgtgttcaaccaaattcgaagtaggttccacgtataagtgcagagtcgtctcgtac
aacttgctgcaacacctttacgtctgtacaacgaatacctcagctttgaaagacatctat
ttctcagcttctgactttaatattggagatgttcacgatgtgacgatcttggatgttcga
ccgactaataactacgtagccgtgagtcttggaagggtgcgtggaattgtcccgcgtgaa
cacatatccgatagcggcataaactgtacgaaacaaccgggggcactccacaaggtccag
gcgagagtcctggatatagatcgcgacaaaaatcggatgaaattcacgctaaagcggtca
ctagtaaacagccaattgccaattttgcaggatttcggcgaagccaaatgcggatcgaag
tatcacggtacggtcagcttgataaataggaacggcttactggtgagattttacgggctg
gtaaaaggctgggtttcgcgtgctacactaaaccccgatacggagcacatgaattggaac
tttttcatcggccagacagtcacagtgcgcgtcgaatcggtggagaaggacaagcgaaga
atgaacctgacaatcgtgaaagaggagaaagagaagaaaagaccagtcgacctttttgtc
ggagagatggtcaaaggaacagtgtcggaaaggacctatctagggatatatgtgaagcta
cagacgaaagatgacgaagctgccgtgacggctttcttgccagctgcacacatggctctg
tgcaccaaaatcggcgcagtgctgacagcgagatacgctcctggagacgtcatcaatagt
attgtctttgccacagaaccaaccgtgctactgacacacactttagtgacgcaacacaaa
tacaggaacttcgactcgttgaaagtgggtgacagtattccatcctcggtctgggaaata
ttgccgaacggcgtgaaagttgtcctgccgatcgataattattccaagctcggttttgta
tcccgcaaatgtatcagcaatttcgagaaactgcacgtgaatcagatattatttgttaaa
atcatagctatcaattcgcaagagagacggctcactttgacgatgtcgctgaaagccgtg
tacgagtgtctgaccgattacgaagacaagatgacgacggcggtgggcatcttgcattgc
tacctcagcacacagcgggatcaagaagatatctatgagcaaatgaacaagccgatctcg
tcggtgtatctaggtcaaaaagtcgtcggcgttgtcaaagagataactgagaacggtctg
ctgtttcgggtgtccgacggactgaactgcattgtacgcaaggaacattgcatcggcaac
cttaaattgggggactcggtgtgcggcacaatcatgtggaagaattatccgcataatatc
ctcaacgtgacgttggtaaagagcataggaaacagtatcacttcgcagaatatgcaactg
ccagaattgcccaccggggttatgctgaaagcgaaaatcttgctcgttctcgattggttc
gtactcattctcgtgaagcgcaacggcttgggacacttggcagctctacctgtccgtcga
cacatcaacgacattgctcccgatctagctccttacaagatccacactaagatccgggtg
tacgttgtaatgacgaagagcgatactggcagtattccaatttgtttgctaaagtctgca
ttcgaagtaccgaagagcacgaccgtgtcgaaaatatcagctaccaagaccaagcacgtg
aagaagaaaaaggtgtctgagccgcacaatcttgcaaattcgacgaagaaagcgctgaag
aaaaataaagtcgaagaggaagagagtagaataaaagacatagatgaacactccgagtcg
aacgaagattctgtcgacgagaatgaaacacagaagagcaaaacagtgaagagattgcgc
cttccggaatgcggattttcttggaacgacacggtagaattggctgctcctgctgaaacg
tccagcgacgacgacgaagagcctgaagaagagtctgagcggaacaagaaaaagaagata
agtgcggctgagcggcgagaacaggaacgacagaaggaacgtgagattcgccagcgagag
gaggctctggtgagcaatcagatacccaattcggtcgatcaatttgacaaattggtcttg
gcaaaccccgatagctcgctactgtggatgcagtacatggcgtatcatctgcaggctacg
gagatcgacaaggcgagagcggtcgcgagacaagccgtgaaaaagatccatttcatgcag
tttgctgagttatcaaacgtgtggaaggcatggctcaacctggagaccagatacggcacc
gccgagtctctgaacgacgtgttccaggaggccgtgaagaataacgatccgagcatgtac
ctgcacatactgactgtgcacgaggacgccggtaaaaaaaaaaagcttaagagattgatc
aaaaccatgaccagcaagtttaaggacgaacccaacacgtggacaaaattctgctcggcg
ttgccgaaactcgacaagaaatcgcggcggctcatgcggcaatcattgaacttttga
DBGET
integrated database retrieval system