Vollenhovia emeryi: 105561056
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Entry
105561056 CDS
T06016
Name
(RefSeq) transcription termination factor 2-like isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vem03021
]
105561056
Transcription machinery [BR:
vem03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105561056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
105561056
NCBI-ProteinID:
XP_011866097
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MERSFTERHVSPRHRPLDSDRGIDSEDDVAGSSRELGKCNVTDESNDNDADMSNNMTSEK
DKFSDDDTPILRLARHINSGRYNVMDNSDEGTDDDEDNSAKYRAVTDLNKTSGLGSSGSL
NETEDTRRKYVSRDNTREGIQELRPNSSSEILNTDFVNIDHSYGQSNTNYKPASAKGKAF
DDEPVTVDLDLDFEQNSESEFATSFAIEDIENVNPAVARNRATEISKLDQCKSDSITIKR
PFTGENIQYLFEKRQRLENCMRQEAGICTLTREMENTPLLSLSSSSGSCSISNVSQEVVV
HTSHFAQKSQSFNVSSDYSDLEDLEFSDFQDYSDPNYSDDDSTDDSYSYFDDMLTRPRRS
WFKKLESARAANNKDRVLTIEGLLNLHGSLVACPSENVKVEDPMGLNVELMPHQRHALAW
LLWRENQKPCGGVLADDMGLGKTLTMISLIVTDLYKNIPDDSNDKEESNDKDKWINKNKP
SYPKGGTLVVCPASLLAQWKNEVWNRCERGLLSVEMYHGNNRQSVSTKLTKNNIVITTYH
ILTREYKFSSTLYKIHWERVILDEAHIIRNPKSQGFEAVCKLSANKRWCLTGTPIQNKEL
DLYSILKFLRCSPFDDIRVWKRWVDKKDKAGHQRLATVMKTLMLRRTKEELMAKGEIENL
PDKSIQEVKVYLDDEEQLVYQKILKYSRTLFAQFLAQREEKQRSGSYTSYGGAYSGTYSG
TYSKPTHFFNSAKASPLTKAQSKLLQMHTNVKTYEILVLLLRLRQVCCHPALIRAMLDQE
DVKQSGIMDMEMEDADFFAHVKNMQRNSNDYAKEKDLGFDPRTVANLLLSQEEGIDKKIL
GDILTSDNSVFDDDRSSSKMKVLLHIVQKILQKDDDKLIIVSQWAKLLDVIASRLSLIKG
ATYSKFTGGVAIKDRQDVVDSFNSQHSGPRILLLSLTAGGVGLNLVGGNHLLLFDIHWNP
QLETQAQDRIYRFGQTKNVYIYKFICVDTIEERVRELQERKLEIARNVLSGDRSNAATKL
TLNDLKSLFGF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggaacggagtttcacggagcggcacgtttcaccgcgccaccggccgctcgacagcgat
cgcggaatcgacagcgaggatgacgtcgccggcagctcgagagagctcggaaagtgtaac
gtcaccgacgagagcaacgacaacgatgctgacatgtcgaacaatatgacgtcggaaaag
gacaaattcagtgacgacgacacgccaatcctgcgtctggccagacatataaatagcggg
aggtataatgtaatggataacagtgatgaagggaccgacgacgatgaagataatagcgca
aagtatcgtgcagttactgacctcaataagacttctggtttaggttcttccggttcactg
aacgaaaccgaggatacaagaagaaaatatgtttcccgtgacaataccagggaaggcata
caagaattaagacccaattcttctagtgagattcttaacacggattttgttaacattgat
cattcgtacggacaaagtaataccaactacaaaccagcaagtgcaaaaggtaaagcgttt
gacgacgaaccagtgactgtggacctcgatttagattttgaacaaaacagcgaatctgag
ttcgcaacgtcttttgcaattgaagatattgaaaatgtgaatccggcagtagcacggaac
agagcaactgagatttccaaattagaccagtgtaaaagtgattctatcacgattaaacga
ccattcactggagaaaatatccaatatttgttcgagaaaagacagagactagaaaattgc
atgcgccaagaagcagggatctgcacgttaacacgcgaaatggagaacactcctttactt
tcgctatccagtagttcaggatcctgtagtatctcgaacgtaagccaggaagtagtagtg
cacacttcgcatttcgcacaaaaatcccagtctttcaacgtgtcctcagattactcggat
ctagaggatctagagttctcagattttcaagattactcagacccgaattactcggatgac
gattccacagacgactcgtattcatattttgacgatatgctaacgagacccagacgttcc
tggtttaagaaactagaaagtgcgcgagccgcaaataacaaagatcgtgttttaacgatt
gaaggattactaaatctgcacggatcgctcgtagcttgtccgtcggagaatgtaaaggta
gaagacccgatgggattgaatgtggagttgatgccgcaccaacggcacgctctcgcatgg
cttctgtggagggagaaccagaaaccatgcggtggcgttttagccgacgacatgggcttg
ggcaagacgctgactatgatatctttgattgtgaccgatctttataagaatattcctgat
gatagtaacgataaagaagaaagtaacgataaagacaaatggattaacaagaataaacct
tcatatcccaaaggtggtactcttgttgtttgtcccgcgtccttgctggcacagtggaaa
aacgaagtttggaatagatgtgaacgcggtctactatccgtcgagatgtaccacggcaat
aaccgacagagcgtcagcacgaaattgacaaagaataatatagtcatcacaacgtatcac
atattaactcgtgaatataaattcagttctacattgtacaagatccactgggagagagtt
atactcgacgaagctcatataataaggaatcctaagagtcaagggttcgaggcggtctgt
aaactgtcagcaaacaaacgatggtgtctcaccggcacgcctatacaaaataaggagttg
gatttatactctatcctgaagtttctccggtgctcgccgtttgacgatatacgcgtgtgg
aaacgttgggttgataagaaggacaaagcgggccatcaaagattggcgacggtcatgaag
acgctgatgttgcggagaactaaagaagaattgatggcgaaaggcgagatagaaaattta
cctgataagtctatccaggaagtgaaagtgtacctcgatgatgaggaacaattagtgtac
cagaaaattttaaagtactcccgcactttgttcgcgcaattcttagctcaacgcgaggag
aagcaacgcagcggttcttacacttcttacggcggggcgtatagtgggacgtacagtggg
acgtacagtaagcctacccattttttcaactctgccaaggcaagtccgttgacaaaggca
caaagcaaattgctgcagatgcataccaacgtaaagacatatgagattttggtactcctc
ctacgactgcgtcaggtatgctgccatccggcattgatccgcgcgatgctggatcaggaa
gacgtgaagcaaagcggaataatggatatggaaatggaggatgccgatttcttcgcccat
gtgaagaacatgcaacgcaacagtaacgattacgcgaaagagaaagacctcggcttcgat
ccgagaacagtggcgaatctactacttagccaggaagaaggtattgataagaaaatactc
ggagatatactcacctctgacaattccgtgttcgacgacgatcgcagtagttctaagatg
aaggtgctgctccacatagttcaaaaaattttacaaaaggatgatgacaagctcatcatt
gtttcacaatgggctaagctactagatgtcatagcgtcgcgcttgtccttgataaaaggc
gctacttatagcaagtttacaggaggtgtcgccattaaagatcgacaagatgtagtggat
tcttttaacagccaacattccggcccgagaattctgttgctctcgctcactgctggcggg
gtgggattaaacttggtaggcggcaatcatttgttgttattcgacattcattggaatcca
cagttagagacgcaggcgcaagataggatttatcgttttggtcaaaccaagaatgtctac
atctacaagtttatttgcgttgatacgatagaagagcgcgttagagagttgcaagagcga
aaacttgagatagcacggaacgtgttgagcggtgacagaagcaacgcggctacgaagctt
acgctgaacgatctgaagtcgctattcggcttctga
DBGET
integrated database retrieval system
