Vollenhovia emeryi: 105562087 Help Entry 105562087         CDS       T06016                                  Name (RefSeq) ATP-dependent RNA helicase DHX36   KO K14442   ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] Organism vem  Vollenhovia emeryi Pathway vem03018   RNA degradation Brite KEGG Orthology (KO) [BR:vem00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     105562087  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vem03019]     105562087    03012 Translation factors [BR:vem03012]     105562087 Enzymes [BR:vem01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      105562087 Messenger RNA biogenesis [BR:vem03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      105562087 Translation factors [BR:vem03012]  Eukaryotic type   Initiation factors    Initiation associated factors     105562087 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD OB_NTP_bind Helicase_C HA2_N HA2_C ResIII NPHP3_N nSTAND3 AAA_22 NACHT ATPase AAA_16 AAA_14 NB-ARC AAA_19 PhoH Dynamin_N ABC_tran ATPase_2 Motif Other DBs NCBI-GeneID:  105562087 NCBI-ProteinID:  XP_011868007 LinkDB All DBs Position Unknown AA seq 975 aa AA seqDB search MNSLLANMSHRRGFRGISNSFARHNRDEPTQSSTSGRAIRGRGYSHAQRPPPGLRGKEIG LFYRNQNIERQKRSAPEVLRLSSELKQKTKIMLNNCKSFYNSDYHENCEFDYYENQIHDS QFKKKFLDIVHGDIQQNLAKAINEKSRLQRNSDMDRILQSEYREMQRHEAYQNMLKFRLK LPAYEKKSEILQLVDDNQVVVISGETGCGKTTQVAQFILDDELESGNGSVTRIVCTQPRR ISAISVAERVAMERAENLGNSVGYQIRLEKSLSREQGSILFCTTGILLQIMKHDPALKNF SHVILDEIHERSTESDFVITLLKQIIPKRPDLKVLLMSATLNAESFSKYYNNCPMIHIPG FTYPVEEFYLEDVLSLVQYKFPEPPPQPTDYRKHLKRYKAQQNKKDEFLDMLQPYIRQLT AEKKYETQVINQLRNPISEDLSLDLIEKLVRYICNTKGPGAILIFLPGMMDISNLNKMML NSQCYPGHRYIIYPLHSRMPTVDQKLIFKQPPEGVRKIIIATSIAETSITIEDVVYVINS GKIKYGKFDVKRNIQTLEPEWVSLANAKQRRGRAGRVTSGECYHMYTRVREMQFAQYPLP EMLRTRLEEVILQIKILQLGKAKQFLATVMDPPDVQAIHLSLQLLETLNALDERENLTPL GYHLAHLPLDPRTGKMILWGALFSCVEPIFAIAASLTFKDAFYCPLGLEEQANKKKLELS MDQCSDHIALAEALKRFEIARQRGRASQFCREYFLSFNTLKLLSEMKIQFAQYLYEMKFL DSENPNHISSNRNSDNISLIKAIVSAGLYPNIAVVRRVNKGGVVCWTPEDGSVRVHPSSV NSKASEFPSRFLTYFTKQRSTAIFLHDTSCISVPILLFAGPNISIRRDKGECIISITNLS QDIVSERDTAELIQELQHALNSLLAYKITNPDTVSWSTVEGDLLNGIIEIVSQTGREASS GNTRVSVYYEDDGAD NT seq 2928 nt NT seq  +upstreamnt  +downstreamnt atgaactctctgcttgcaaatatgtcgcacagacgcggtttcagaggcatttccaactcc ttcgcgagacataacagagacgagccaacacagtcgtctacatctgggagagccatccgt ggaagagggtactcacatgcacaaagacctcctcctggattaaggggaaaagaaatagga ttgttttatagaaaccaaaatatagagagacaaaagaggagtgcgccagaagtgctcaga ctatcatctgaattgaagcaaaaaactaagattatgttaaataattgcaagagcttctac aattcagattatcatgaaaattgcgagttcgactactacgagaatcaaattcacgatagc caatttaaaaaaaagtttttggacatcgtacatggtgatatacagcaaaatcttgccaaa gctataaatgaaaagtcaagattacaaagaaatagtgacatggacagaatattacaaagt gaatacagagaaatgcagagacatgaggcttatcaaaatatgttgaagtttcgattaaag ttaccagcgtatgagaaaaaatcagaaatattacaactggttgatgacaatcaagttgtt gttattagtggagaaactggatgcggtaaaaccactcaggttgcacaatttatattggat gacgagttagaatctggaaacggtagtgtcactcgaatagtttgcacacagcctagaagg atctctgctatttccgttgctgaacgtgtagctatggaaagagcagaaaatcttggaaac tctgttggctatcaaatacgacttgaaaaatctttatcacgagaacaaggaagtatattg ttttgtactactggtatattactacaaataatgaagcatgatccagcattgaaaaatttc tctcatgtaatattggatgaaattcacgaacgttctacagaaagtgattttgtcattaca ttattaaagcaaattattccaaaaagaccggatttaaaagttctcttgatgagtgcaaca ttgaatgctgaaagtttttcgaaatactataacaattgtccgatgatacatataccagga ttcacctatccagtagaggaattttatttagaagatgttctgtcacttgtacaatacaag tttccagagccaccaccacaacctacagattacaggaaacatctgaaaagatacaaagcg caacaaaacaagaaagacgaatttttagacatgttgcaaccttatattagacaacttaca gctgagaagaaatacgaaacacaagttattaatcagttacggaatccaattagtgaagat ctttcactggaccttatagaaaaattagttagatatatctgtaatacaaaaggtcctgga gctattcttatttttttacctggtatgatggatatatcaaatttaaataaaatgatgttg aattcccagtgttatccaggtcacagatacatcatctatcctcttcattcacgcatgccg acagttgatcagaaacttatattcaaacaacctcctgagggcgttcgtaaaataatcatt gcgacttcaattgctgaaacgtcaataactatagaagatgttgtatacgtaataaatagc gggaaaataaaatatggaaaatttgatgtaaaacgtaatatccagactttagagcctgaa tgggtgtctttagctaatgcgaagcaaagacgcggtagggctggcagggttacaagtgga gagtgttatcatatgtatacaagagtacgagaaatgcaatttgctcaatatccattgcca gagatgctgagaacgcgcttagaagaagtaattttgcagataaaaatcctgcaattaggg aaagccaaacagttcctagctaccgtcatggatccgccagatgtacaagccattcatctg tctctccaattactagaaacactcaatgccctcgacgaacgtgagaatctaactcctttg ggttaccacttggcgcacttgccacttgatcctagaacaggaaaaatgattctgtggggc gcattgttttcctgtgtcgagccaatatttgctattgctgctagtctcacatttaaagat gctttctattgtccattaggactagaggaacaggctaataaaaagaaattagaactcagc atggatcagtgtagtgatcatattgctctcgcagaagctttaaaaagatttgaaattgca cgtcaaagaggacgtgcttcccagttttgccgagagtatttcctttctttcaacacattg aagctgctctccgaaatgaaaattcagtttgcacagtatctatatgagatgaagtttctg gacagcgaaaatccaaatcatataagctccaacagaaactcagataacatatcattgata aaagctattgtcagtgcaggattatatcctaacatcgctgttgtaaggcgagttaataaa ggcggagtggtctgttggacaccggaggacggtagcgtacgtgtacatccatcgagtgta aacagtaaagcttcagagtttcctagccggttcttgacgtatttcacgaaacaacgttcc accgccatatttttacatgacacttcgtgcataagtgtaccaattttattgttcgccgga ccaaatatatcgataagacgagataaaggagaatgcataattagtatcacgaatttatcg caagatattgtttctgaacgagacactgcggaactgatacaggaacttcaacacgctctg aatagtttactggcatataagattacgaatccggacacagtatcttggtcaaccgttgaa ggggacttattgaatggcatcattgaaatagtgtctcaaacaggtcgagaagccagttct ggtaacacgcgcgtaagcgtatattatgaagatgatggtgctgattga

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