Vollenhovia emeryi: 105562325
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Entry
105562325 CDS
T06016
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
vem
Vollenhovia emeryi
Pathway
vem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105562325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vem03400
]
105562325
DNA repair and recombination proteins [BR:
vem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105562325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
SOG2
Motif
Other DBs
NCBI-GeneID:
105562325
NCBI-ProteinID:
XP_011868457
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MNESDDDSSDSSNDFAGITPKDELTASFFTIKPATRPSLVRHGSEDESSDDETLASVPEG
SDIELFSEVVRNLEASQRARVDQEEPGRGSSGNDRAARVEKRAGSISDEINAVLLQGESG
ARAFDEDDGDTGDEEEPEGDVKRPEDYAIPKEGVRITLPGTSAVFRKRASGKRESDLAAL
LRRRLKANQIVVEKAGRLCWLAYGFHLSRQACDPEVMATAVSLVSTKSYPKDNFDLEYLK
KLTKWFKGTFAIEAAGDDQVVINKETLLQRLAEKRIYNYRELVILYVAVLRGIGLHCRLV
VSLNPPLVKACNELLPKPSAAKKDGKVKEETKATRAKVASKGGKKSARSKEDLAGSSAIR
NDEAARRNANADAKKKAAEILRSKYSYGKKSRDKLNSDASARETASTSTRVETASSSRKA
ETGPSPRRLRPREAHGVASTSAEQRNAAKTTSEDNRPRASNSKRQSRSDGSNSEGAEEPS
SKSKRKCGSRNKVVGSKGKNEEAQASTDDEETDNKLRKRRDVWAEVYVESKASWICVNVM
DGNVDCVAEIYKAATKPVLYVIAYNSESLIKDVTRRYCPQWLSVTRKQRIDEKWWTETLS
YWQERETAMSRQEDELLLQKELEQPLPKTVGECKGHPLYVLVRHLLKYEALYPPDCVPLG
HLKTGEAIYSRYCVHTLCSRETWLKKARVVKPKQEPYKIVKALPKYDKLSGMRLKDAALE
IFGEWQTTDYVPPEAKDGVVPRNEYGNVDLFKKCMLPKGTVHINLPGLNRVARKLNIDCA
TAVVGFNFGCMGAVPATEGYVVCAEYEDTLREAWESEQIEAAKRAAEKTRKKVYGNWRKL
IRGLLIREKLAQKYDFRDKSKADQPSKRPRSQKGAAKKSKAQ
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagtccgacgatgacagttccgacagcagcaacgatttcgccggcatcacgccg
aaggacgagctgacggcgagcttcttcacgattaagccggcgacgaggccgagcctggtg
aggcacggcagcgaggacgagagcagcgacgacgagacactggcgagcgtgcccgagggc
agcgacatcgagctgttctccgaggtggtgaggaacctcgaggcctcgcagagggctcgc
gtcgaccaggaggagcccgggcgcggctcctccgggaacgacagagccgccagggtcgag
aagcgggcgggcagcatatccgacgagataaacgccgtcttgctccaaggggagagcggc
gcgcgggccttcgacgaggacgacggggacacgggcgacgaggaggagccagagggggac
gtcaaacgccctgaagattatgccatacccaaggagggtgtgaggatcacgttgccgggc
acgagtgcggttttccggaagagagcgagcggcaagagggagtcggatctggccgcgctt
ctacgaaggaggttgaaggccaatcagatcgtcgtggagaaggcgggcagactctgctgg
ctggcgtacggctttcacctgagccgccaggcgtgcgatcccgaggtgatggcgacggcg
gtgtcgctcgtctcgaccaagagctatccgaaggacaactttgacctggagtacctgaag
aagctgacaaagtggtttaaaggtacgttcgcgatagaggccgccggcgacgatcaagtc
gtcataaacaaggagacgctgttgcagcgactcgcggagaagagaatttacaattacagg
gaactggtgatactgtacgtggcggtactgcgcggcatcggcttgcactgccgtttggtg
gtgtctctgaatccgccgctggtgaaggcctgcaatgagctgctgcccaagcccagcgcg
gcgaagaaagacggtaaagtcaaggaagagacgaaggcgacgagagccaaggtggcgtcc
aagggaggcaagaaaagcgcgagatcgaaggaagatctcgcgggtagcagcgcgattcgg
aacgacgaggccgcgcgaagaaacgctaacgccgacgcgaagaaaaaggcggcggagatc
cttcgctccaagtactcgtacggcaagaaaagtcgggacaagttgaacagcgacgcgtcc
gcgcgcgagaccgcttccacgtccacgagggtcgagacggcttcgagttcgcggaaggca
gagaccggtccgtcgccgaggcgtttaagacctcgcgaagcacacggcgttgcgtctacc
tcggccgaacaacggaacgctgccaagactacgtcggaagacaatcggcctagagcgagc
aattctaagaggcagtcgcggagtgacggctcaaattccgagggagcagaagaaccgtcc
agcaaatcgaagcggaaatgcggcagcaggaacaaagtcgtcgggtctaaaggaaagaat
gaggaggcgcaagcgtccacggacgacgaagagacggacaataagttgaggaagagacgg
gacgtgtgggccgaggtgtacgtggagtccaaagcgagctggatttgcgtaaacgttatg
gacggaaatgtggattgcgtggccgagatatataaagcagcaaccaagccagtattatat
gtgatagcttacaattcggaaagtttaataaaggatgtcacgaggcgctactgcccgcag
tggctctctgtcacgcgcaagcagcgtatcgatgagaaatggtggaccgagaccctaagt
tattggcaggaaagggagacggccatgtctaggcaggaggatgaactgctgctgcaaaaa
gaattggagcagccgctgcctaaaaccgtcggcgagtgcaaaggtcacccgctgtacgtt
ctcgtcaggcatttacttaaatacgaggccttgtacccgccggattgcgtgccgttggga
cacctgaaaaccggcgaggctatttactcgcggtactgcgtgcacacgctgtgctcgcgg
gagacttggctgaagaaagcccgggtggtcaaaccgaagcaggagccctacaagatagtt
aaggcgcttcccaagtatgacaagctttcaggcatgagactcaaggacgccgcgttggag
atattcggagagtggcagaccacagactacgtcccgcccgaggccaaggacggtgttgtg
cctcgcaacgagtacgggaatgtggatctgtttaagaaatgtatgcttccgaaaggcaca
gtgcacataaaccttccaggattgaaccgcgtcgcgcggaaattgaacatagattgcgcg
actgccgtggtgggcttcaatttcggctgcatgggcgccgtgccagccaccgagggctac
gtcgtgtgcgccgagtacgaggacacgctgcgagaggcctgggaatcggagcagatcgag
gcggctaaacgggccgccgagaagacgaggaagaaggtctacggcaactggcggaagctt
atcaggggtttgctcatcagggagaagctggcgcagaaatatgactttagggacaaatcg
aaggcggaccagccgagcaaacgtccgagatcgcagaagggcgccgcgaagaagtccaag
gctcaatag
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