Vollenhovia emeryi: 105562455
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Entry
105562455 CDS
T06016
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
vem
Vollenhovia emeryi
Pathway
vem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105562455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vem03019
]
105562455
Messenger RNA biogenesis [BR:
vem03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105562455
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105562455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
V-SNARE
FlgM
Motif
Other DBs
NCBI-GeneID:
105562455
NCBI-ProteinID:
XP_011868702
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDEVTNWLANSIDALNLQMDTFESEIESLQAGKKKRIDKDKQDRVDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPSLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNTQASIPTTGSTATIKSNMLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHSNSQAIHSTSNKTSTHNSENNILSSSSTSNVTSNAPQTVAQQHNNNPAPAQTTHV
LHSQQSQNHNSETEMTTPVPPSSSPQSSVSSRSSPMPANSCSPAPSTANGLIPKLPDGSM
SSLKSIAQQVIVRAGLEIPPSEPNRNIFDSAKTSNSSNSNATSEAHIPPLLGVAPLGPVP
LQKEHQLQFQMMEAAYYHMPHPSDSERLRSYLPRNMCTTPPYYQQVQLPHSDTVEFFQRL
STETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIY
FDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtgacagag
ggtgtggagacattcgaagatatctggcaaaaagttcacaatgccacgaacagcaatcag
aaggaaaagtacgaggctgatctcaaaaaggaaatcaagaaacttcagaggttacgcgat
caaatcaagagctggatcgcgtcgggtgaaataaaggacaagagcacgcttctcgactat
cggaagttgatcgagactcaaatggaaagatttaaagttgtagaaagagagacgaaaaca
aaggcttactctaaagaaggtttaggcgctgcgcagaaattggacccagctcagaaagag
aaagatgaggttactaattggctagccaattctatagacgctctcaatctgcagatggat
acatttgaatcggaaatagaatcgttacaggcgggaaagaagaaaaggatagacaaagac
aagcaagatagggtggacgagttgaaggcaaagctggacaaacaccgctaccatatccgt
aaattggagacgttattacgtatgcttgataatatgtctgtcgaagtcaacacaatcaag
aggataaaggacgatgtcgagtactacatcgagtcctcgcaggatcccgattttgaggaa
aatgagtatatttacgacgacattatcggcctcgatgaagtcgagctatccggagttggt
atcccctcgtctgcgacgacggacagtaacaacagcaatgaaaccgggggcacgccgacc
tcgaccaattcctgtacttcgcctataccgtcgccgtcgttaagctcaactatgcataat
cattcgagcgatagttccacggacaatgacaagaagaccaagcctgtgaaaccgacagca
gtcaggccgctactgaatacgcaagcgagcattccaaccacgggaagcactgccaccata
aaatcgaacatgttatcgagcagcactccaagcaaaaccattcccatgacacctagccat
agctcgcctagttctacaagcaatcacattgccacgactaacgccggcaatttcgccacc
gtagctgcctcgcacagcaattcgcaagccatccattctacctccaacaaaacatccact
cacaacagcgagaataatatcttgtcatcgtcatccacgtccaacgttacgtcgaacgcg
ccgcaaacggttgcgcaacagcacaataataatccagcgccggcacagacgacgcacgtg
ttgcacagccaacagagtcagaatcacaacagcgaaacggaaatgaccacgccggtgccg
ccatcctcgtcgccgcagtcgtcggtcagcagtagatcctcgccgatgcccgcaaactcc
tgctcgccagcgccgtccactgccaatggtctcatccctaagcttcccgacggaagcatg
tcctctctaaagtccattgcccaacaagtaattgtccgagcaggtctcgagataccaccc
tccgagccgaatagaaacatctttgacagtgccaagacgagcaacagcagcaacagcaac
gccacgtcagaagcacacattcctccgttactcggcgtcgcgccgttaggacccgtgcca
ctacaaaaggaacaccagctgcagttccaaatgatggaagctgcctactaccacatgcca
catccgtctgactcggaaagattacgctcgtatttaccgagaaacatgtgcaccacgcca
ccctattatcagcaggttcagcttccccattcggacactgtagagttcttccaacgtctt
tctacggaaacactgttcttcatattttattatatggagggttctaaagggcagtatcta
gcagcaaaggcattgaagaaacaaagttggaggtttcacactaagtatatgatgtggttc
caaaggcatgaagaaccgaaagttattaacgaggaatacgagcagggaacgtacatctat
tttgactacgaaaagtgggggcagaggaaaaaagaaggctttactttcgaatacaagtac
ttagaggacagagacctgaactaa
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