Vollenhovia emeryi: 105562475
Help
Entry
105562475 CDS
T06016
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
vem
Vollenhovia emeryi
Pathway
vem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105562475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vem03019
]
105562475
Messenger RNA biogenesis [BR:
vem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105562475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
105562475
NCBI-ProteinID:
XP_011868731
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MSFGSGFGTSTSTSAPTFAFGTTPASTATPVKPVAGFGTPSFGFSVPTTSTPSLFGTLST
QPTGFGTGTATGFGSPTAAGFGNAPSTGFGSAPAFGATPTSTFGSAPAFGSTPAASTATG
FGTISTFGCTPASAPACFAGFGTATTSTLSFGGFGGFGTTTTTSTPSLFGGFGTTNIAPT
GFGTSTGFGAFGSKPATTSGTPGFGGFGTGTGFAGFGTGPAQPQQPTKSEALYNAVFNCQ
LYNDERDNTIARWNLIRALWGTGKAYYSINAPPIDLTQENSLCRFKAIGYSRIPDADNND
GLVVLCFNKKEKDVQDGKQQLIVFLNGLLGNKPNLIVTVDNVKSTGENKSQVTTYVSEKG
ITGSYRKIPANELVAYLSQVMQKQQLVQNGVEDVFPLVKLDPSQLKEYLDNPPCAIDARL
WKQAQLDNPNPELYIPVPIVGFQQVKHRLKCQEEETARHRAFLDLAAEKIQGLQRQHTAT
QARLKEHRRALLELQHKVLQLLVRQEITRKVGLALQPAEEGLTRRFEAMHSQISAPTQYK
GRISEMLSQLRMRRHIDIQNQERYTMDPIAQDDIKTYLSMEQQGMAQLISTINADLESLK
IIKDGMSELLITQSIS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggcagcggtttcgggacgtccacgtccacgtccgcgcccacgttcgccttc
ggcaccacgccggcgtccacggcgacgccggttaagcctgtggcaggatttggaacgccc
tcgttcgggttcagcgtaccgaccacctcgacgccaagcctgttcggcacgctgtcgacg
cagccgacaggattcggcaccggcaccgccaccggattcggcagcccgaccgccgccggc
ttcggtaacgcgcccagcacgggcttcggctccgcgcccgcgttcggcgccacgcccacc
agcaccttcggctcggcgccggctttcggtagtactcccgccgcctccacggccactgga
ttcggcacaatctcgacattcggctgcacccccgccagcgcccccgcttgcttcgctggc
ttcggaacagcgacgacgtcgacgctgagcttcgggggcttcggtggattcgggacgacc
accaccacgtctacgcctagcttgtttggcggatttggcactacgaacatcgccccaacc
ggcttcggcacgtccacgggtttcggtgcattcggaagcaagccggctaccaccagcggt
acccctggattcggtggatttggaacggggacaggattcgctggatttggtactggaccg
gcacagcctcagcagcctacaaagtcagaggctctctataatgctgtgttcaattgccag
ttgtacaatgacgaacgagataataccattgctaggtggaatcttattcgggcgttgtgg
ggtacaggaaaagcatattattccataaacgccccgcctatagatcttactcaggaaaat
tcgttgtgcagattcaaagccatcggatacagtcgtatacctgatgctgacaacaacgat
ggtttagtagtattgtgctttaataagaaagaaaaggatgtacaggatgggaaacagcag
ttgatagtatttctcaatggtttgttggggaataagcccaatctgatcgtaaccgtggat
aatgtaaagtcaacgggagagaacaagagtcaagtgacaacatacgtgtcggaaaaagga
atcaccggttcctacagaaagatccctgccaacgaattggtcgcgtacctgtcgcaggtg
atgcagaaacaacagttagtacagaacggggtcgaagatgtatttccgctggtgaaactt
gatccgtcgcagctaaaagagtacctggataatccaccctgtgctatcgacgcgagatta
tggaagcaagcgcagttggacaatcccaatccggagctgtatattccggttcctatagtc
ggcttccagcaagttaagcacagattaaagtgtcaagaggaggaaactgctagacataga
gcgtttctagatttggcggctgaaaaaatacaaggcttgcaaaggcagcacacggctacg
caggcccgactcaaggaacataggcgtgcgttattggaacttcaacacaaggttctacag
ttgctggtacggcaggagattacgcgaaaagttggattagccttacaaccggcagaggaa
ggtttaacacgcaggttcgaagcgatgcattcgcaaatcagtgctccaacgcaatacaaa
ggtagaattagtgaaatgctttctcagcttagaatgaggcggcacattgatattcagaat
caagagaggtatacaatggacccaatagcacaggacgatattaaaacatatttaagtatg
gaacagcagggaatggcgcagcttatttcgacaataaatgcggatttagaaagcttgaaa
atcattaaggatggaatgtcagagcttttaataactcaaagtatatcatga
DBGET
integrated database retrieval system
