KEGG   Vollenhovia emeryi: 105562512
Entry
105562512         CDS       T06016                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
vem  Vollenhovia emeryi
Pathway
vem03030  DNA replication
vem03410  Base excision repair
vem03420  Nucleotide excision repair
vem03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105562512
   03410 Base excision repair
    105562512
   03420 Nucleotide excision repair
    105562512
   03430 Mismatch repair
    105562512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vem03032]
    105562512
   03036 Chromosome and associated proteins [BR:vem03036]
    105562512
   03400 DNA repair and recombination proteins [BR:vem03400]
    105562512
DNA replication proteins [BR:vem03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105562512
  DNA Replication Termination Factors
   ELG1-RFC complex
    105562512
Chromosome and associated proteins [BR:vem03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105562512
DNA repair and recombination proteins [BR:vem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105562512
  Check point factors
   HRAD17(Rad24)-RFC complex
    105562512
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 RCF1-5-like_lid AAA_16 Viral_helicase1 Rad17 AAA_24 Mg_chelatase AAA_11 AAA_assoc_2 nSTAND3 RuvB_N AAA_19 AAA_18 MeaB MipZ ABC_tran AAA_28 NTPase_1 DNAX_ATPase_lid IstB_IS21 RNA_helicase AAA_5 AAA_7 DUF5387 MCM AAA_25 AAA_3 ATPase_2 AAA_30
Other DBs
NCBI-GeneID: 105562512
NCBI-ProteinID: XP_011868809
LinkDB
Position
Unknown
AA seq 351 aa
MAGDGVVDEPMETEVLPSTSNGDPKIRERDGKSANLPWIEKYRPQVFSDIVGNEDTVSRL
AVFAQHGNTPNIIIAGPPGVGKTTTILCLARTLLGPAFKEAVLELNASNERGIDVVRNKI
KMFAQKKVNLPKGKHKIIILDEADSMTDGAQQALRRTMEIYSHTTRFALACNNTEEIIEP
IQSRCAMLRYGKLTDAQVLAKVLEVCEKENISYTDDGMEAIVFTAQGDMRQALNNLQSTY
NGFNHVNAENVFKVCDEPHPLIVKEMLDDCVKGEVSKACTVMDHFWKMGYSAEDIVSNVF
KVCKNHTMDEKLKLKFIKEIGLTHMGVVEGINSLLQLHALVARLCRTCASK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcaggtgatggtgttgttgacgaacctatggagactgaggttttgccgtccacgagc
aacggtgatccgaaaatcagggagagagacggcaaatcagcaaatttgccgtggattgaa
aagtatcggcctcaagtattttccgacattgttggcaacgaagacactgtgtctagatta
gctgtttttgctcagcatggaaatactccaaatatcatcatcgctggcccgcctggagtg
ggcaaaactaccacaattttatgtcttgctcggactttattgggaccagcgttcaaagaa
gccgtacttgaactgaacgcctcaaacgagagagggattgatgtagttagaaataaaatc
aaaatgtttgctcagaaaaaggtgaatcttcccaaaggaaagcacaagatcattatttta
gatgaagctgacagcatgactgacggtgcgcaacaggcgttacgccggacgatggaaatt
tacagtcacacaaccagatttgctctcgcatgcaacaatacggaggagattatcgaacct
atacagtcgcgctgtgctatgttaagatacggaaagttaacggacgcccaagtcttggcc
aaagttctcgaagtctgcgaaaaagagaatatttcctacacagacgatggtatggaagcg
atagtatttacggcacagggagacatgagacaagccctgaacaatctgcagtctacatac
aacggatttaatcatgtaaacgcggaaaatgtatttaaagtctgcgacgagccgcatcca
ttaattgtcaaagagatgctggatgattgtgtgaagggcgaagtttctaaagcatgcacg
gtaatggatcatttctggaaaatggggtattctgctgaagatatagtcagtaacgtgttc
aaagtttgtaaaaatcacaccatggatgaaaagttgaaactgaaatttatcaaggaaatt
ggattaacacatatgggagtggtagaaggtatcaacagtttgttacagttacacgcttta
gtggcaagactttgccgcacatgtgcgtcaaaataa

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