Vollenhovia emeryi: 105562512
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Entry
105562512 CDS
T06016
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
vem
Vollenhovia emeryi
Pathway
vem03030
DNA replication
vem03410
Base excision repair
vem03420
Nucleotide excision repair
vem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105562512
03410 Base excision repair
105562512
03420 Nucleotide excision repair
105562512
03430 Mismatch repair
105562512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vem03032
]
105562512
03036 Chromosome and associated proteins [BR:
vem03036
]
105562512
03400 DNA repair and recombination proteins [BR:
vem03400
]
105562512
DNA replication proteins [BR:
vem03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105562512
DNA Replication Termination Factors
ELG1-RFC complex
105562512
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105562512
DNA repair and recombination proteins [BR:
vem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105562512
Check point factors
HRAD17(Rad24)-RFC complex
105562512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RCF1-5-like_lid
AAA_16
Viral_helicase1
Rad17
AAA_24
Mg_chelatase
AAA_11
AAA_assoc_2
nSTAND3
RuvB_N
AAA_19
AAA_18
MeaB
MipZ
ABC_tran
AAA_28
NTPase_1
DNAX_ATPase_lid
IstB_IS21
RNA_helicase
AAA_5
AAA_7
DUF5387
MCM
AAA_25
AAA_3
ATPase_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
105562512
NCBI-ProteinID:
XP_011868809
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MAGDGVVDEPMETEVLPSTSNGDPKIRERDGKSANLPWIEKYRPQVFSDIVGNEDTVSRL
AVFAQHGNTPNIIIAGPPGVGKTTTILCLARTLLGPAFKEAVLELNASNERGIDVVRNKI
KMFAQKKVNLPKGKHKIIILDEADSMTDGAQQALRRTMEIYSHTTRFALACNNTEEIIEP
IQSRCAMLRYGKLTDAQVLAKVLEVCEKENISYTDDGMEAIVFTAQGDMRQALNNLQSTY
NGFNHVNAENVFKVCDEPHPLIVKEMLDDCVKGEVSKACTVMDHFWKMGYSAEDIVSNVF
KVCKNHTMDEKLKLKFIKEIGLTHMGVVEGINSLLQLHALVARLCRTCASK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgatggtgttgttgacgaacctatggagactgaggttttgccgtccacgagc
aacggtgatccgaaaatcagggagagagacggcaaatcagcaaatttgccgtggattgaa
aagtatcggcctcaagtattttccgacattgttggcaacgaagacactgtgtctagatta
gctgtttttgctcagcatggaaatactccaaatatcatcatcgctggcccgcctggagtg
ggcaaaactaccacaattttatgtcttgctcggactttattgggaccagcgttcaaagaa
gccgtacttgaactgaacgcctcaaacgagagagggattgatgtagttagaaataaaatc
aaaatgtttgctcagaaaaaggtgaatcttcccaaaggaaagcacaagatcattatttta
gatgaagctgacagcatgactgacggtgcgcaacaggcgttacgccggacgatggaaatt
tacagtcacacaaccagatttgctctcgcatgcaacaatacggaggagattatcgaacct
atacagtcgcgctgtgctatgttaagatacggaaagttaacggacgcccaagtcttggcc
aaagttctcgaagtctgcgaaaaagagaatatttcctacacagacgatggtatggaagcg
atagtatttacggcacagggagacatgagacaagccctgaacaatctgcagtctacatac
aacggatttaatcatgtaaacgcggaaaatgtatttaaagtctgcgacgagccgcatcca
ttaattgtcaaagagatgctggatgattgtgtgaagggcgaagtttctaaagcatgcacg
gtaatggatcatttctggaaaatggggtattctgctgaagatatagtcagtaacgtgttc
aaagtttgtaaaaatcacaccatggatgaaaagttgaaactgaaatttatcaaggaaatt
ggattaacacatatgggagtggtagaaggtatcaacagtttgttacagttacacgcttta
gtggcaagactttgccgcacatgtgcgtcaaaataa
DBGET
integrated database retrieval system