Vollenhovia emeryi: 105562858
Help
Entry
105562858 CDS
T06016
Name
(RefSeq) integrin alpha-PS1 isoform X1
KO
K06583
integrin alpha 7
Organism
vem
Vollenhovia emeryi
Pathway
vem04512
ECM-receptor interaction
vem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105562858
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105562858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vem04147
]
105562858
04515 Cell adhesion molecules [BR:
vem04515
]
105562858
Exosome [BR:
vem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105562858
Cell adhesion molecules [BR:
vem04515
]
Integrins
Integrin alpha subunits
105562858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
HisK_sensor
Integrin_alpha
VEGFR-2_TMD
PliI
Motif
Other DBs
NCBI-GeneID:
105562858
NCBI-ProteinID:
XP_011869360
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
METSALLWIIALSACVTHAFNLEPRIPVVKRGLQGSYFGYSVAEHIEIENHSLSKSTSWM
LIGAPLDQNRQPGTNRSGALWQCPLSTYTTDCIQVITDGRLMDDGLLYRSYESYGSNLES
DDLIPPGNDEIKDNQWLGVTVRSQGVGGKVMVCAHRHIVKTADSQWGQGQCYILSQDLKY
DDLKKPCSGKPTNKAHEQFGYCQAGTSGLLTAEDRVVIGTPGPHTWRGTLYLFTISDEFL
TRDNTVYNAPMQDFSPVNKYSYLGMSVAVGNFFGKDLAYAAGAPRSNGTGQVVLFTRRDF
KPDMDVALVLDGEQFASSYGYEIASADVNGDKVTDLIVAAPFYFNKAEGGAVYVYTALDV
CRTTKDNERCLPVKLVGHEESRFGFALTNLGDLNKDGYEDIAIGAPYEGKGTVYIYLGSK
NGIKKTPSQIIHAEDMPTPLKTLGYSLSGGTDMDNNGYTDLLIGAYENDAVVLLRSKKII
DITTSIRHANKDGIYQDTIEPIDPNRIGCLADLNSNYTCFAFEACCKTESLGKEDYMQNL
RLNYYIEAETYTGTKKFSRVWFAVSGNARPHYLNRTVTLDSTKLMHCQKEIVYLKENTRD
IQTPIKFRLNYSLIQEEPVMPLEGAPLPDMKNYPILNQQEAARVFEAVFQKDCGNNDICE
SDLQVIAKLNLSASSIKPDFYELFLGEREEIVVEANVANIGESAYEAQLFIVHSPNLNYI
ASKSNDSVICNLYNATIVSCSIGNPFKKDKAVDIQVRFDPKGLEDNESQLSFTIFANSTS
KEVKEKQPILLQATVLKRAELSIKGSAKTQWAFYGGPVVGESAIKHLNEVGPKVSHIYEV
FNEGPWKVSTVEVRISWPYEVANDKTHGKWLLYMEEMPTIQALGDGECILPPGHVVNPLK
LQDNTNLDDIDSIIQSSTPSTILYNHTNHIRTTRDTEKVVNTRTIVDKDGHRHRVVAMNC
KAGTAKCFDIVCYIYNLQRKQEAIITVKARLWNSTLVEDYPKVDMVKIGSNARIVIPSTI
VIQQENLKDDYAIAETIAYPDLLDQQEAEPVPVWIYIVAAVAGMLLFILLTLILRKLGFF
KRRRPDPTLSGNLEKHRDDNPENEALFKH
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggagacgagcgccttactctggattatagctttgagtgcgtgcgtcacgcacgccttt
aatctcgaaccacgaatacctgttgtcaaaaggggcctgcagggctcctactttggctac
tccgtagccgagcatatagagatcgagaaccactcgttatcgaaatcgaccagttggatg
ctcatcggcgcacccttggatcaaaatcgacaaccgggtacaaacagatcgggagcgttg
tggcaatgcccgctgagtacatatacaacggattgtattcaagttattaccgatggacgg
ttgatggacgatggtctactatacagatcatacgaatcgtacggttcaaatttggaatcg
gacgatttaatacctccggggaatgacgaaataaaagataaccaatggttaggagttact
gtacgtagtcaaggagtaggaggtaaagtaatggtatgcgcgcaccgccatatcgttaaa
acagccgattctcagtggggtcaaggccaatgttacatattatcacaggatttaaagtac
gacgatttgaaaaagccatgctctggaaaacctaccaacaaagcccacgagcagtttggt
tactgtcaggccgggaccagcggtttattaactgctgaagatcgtgtagtgattggtacg
ccaggaccacatacttggagagggactctttatctattcactatttccgatgaattttta
accagggacaatacagtttataacgcgccaatgcaagatttctcgcctgttaataaatac
agctatctaggaatgtccgtggccgttggaaacttctttggcaaggatttggcttatgcg
gcgggtgcgccccgttctaatggcacgggccaagtagtgttgttcactaggcgtgatttc
aagccggacatggatgttgctcttgttttggacggcgaacaattcgcctcgagctatgga
tacgaaatcgcatcggcagatgtaaacggagacaaagttactgatttgatcgtggcagca
ccgttttatttcaataaagccgagggcggagctgtctatgtttatacagcgctagatgta
tgcagaaccaccaaagataacgagaggtgtttgcctgtcaagctcgttggtcacgaggaa
tcaagattcggattcgcactgacaaatttgggtgatttgaacaaggatggatacgaagat
atcgcaattggtgctccatacgaggggaaaggaacagtttatatttatctaggttccaag
aatggcattaagaaaacaccgtcacagatcattcatgctgaagatatgcctacgccactg
aaaacacttggttactcgttaagcggcggaaccgacatggacaacaatggttatacggat
ctcttgatcggagcatacgagaatgatgcagttgtacttctccgttccaagaaaataatc
gacatcactacttctatacgccatgcgaacaaggatggaatatatcaggatacgatagag
cctatcgatcccaacagaattggatgtttggccgatctaaattcaaattatacatgcttc
gcatttgaggcctgctgcaagacggaatcgctagggaaagaagattatatgcaaaaccta
agattaaactactacatcgaagcagagacctacactggaacgaaaaaattctccagagtt
tggttcgccgtcagtggtaacgcacgtcctcattacctcaatcgaacagtcaccttggat
agtacaaagttgatgcactgccaaaaggaaattgtctatctaaaggagaatacacgcgac
attcaaactcccatcaaattccgtctgaattattcgctgatacaagaagagccagtcatg
cctctcgaaggtgctcccttgcccgacatgaaaaattatccaatactgaatcaacaagaa
gccgcacgtgtattcgaagctgtctttcaaaaggattgtggaaataacgacatttgcgag
agtgatttgcaagtgatagctaaactgaatttatcagcttcctccataaagccggacttt
tacgagctgtttttgggcgagagagaagagatagttgtggaagcgaatgtggcaaacatt
ggcgagtctgcatacgaggctcaactgtttatcgttcactcaccgaatttaaactacatc
gccagtaaaagcaacgattccgtcatctgtaatttgtacaacgctactatagtatcgtgc
tctattggcaatccgttcaaaaaggataaagcggtggacatacaagtgagattcgatccc
aagggtctcgaagacaatgaatcgcaattgagttttacaattttcgcaaattccacctcg
aaggaagtgaaagagaagcaacccattctgctgcaagctacagtgttaaaacgcgccgag
ctctcgattaaaggaagcgcgaaaactcagtgggcgttctacggtggccccgtagttgga
gaatccgcgataaaacacttgaatgaagtaggaccgaaggtgtcgcacatttacgaagta
tttaacgaaggtccatggaaagtcagcactgtggaggttcgcatttcatggccttacgag
gtcgcgaacgacaaaacgcacggcaagtggctgctctatatggaagagatgccgactata
caagctctaggagatggtgaatgtatattaccaccaggacatgtagttaatccattaaaa
ctacaagataataccaacttggatgatatcgatagcattatacaatcttcaactccatcg
acaattttgtacaaccatactaatcacataagaacaacgcgagatacagaaaaagttgta
aatacgcgaacaattgtcgacaaggatggacatcggcatcgtgtcgttgcaatgaattgt
aaagctggcacagcaaaatgtttcgacattgtatgctatatatacaacttgcagaggaaa
caggaagccatcataactgttaaagcaagactttggaattctactttagtcgaagattat
ccaaaagtggacatggttaaaataggttccaatgctaggatagttataccttcgacaatt
gtgatacagcaagagaacttgaaggatgattacgcaattgccgagacaattgcttatcca
gatctattggatcagcaagaagccgagcctgtaccagtgtggatatatatagtggccgca
gtagccggcatgctattattcattttacttacattgatattgagaaaacttggattcttt
aagaggcggcgaccagatccgaccctatctggaaatcttgagaagcacagagatgataat
cctgaaaatgaagcattgttcaaacattaa
DBGET
integrated database retrieval system
