KEGG   Vollenhovia emeryi: 105563322
Entry
105563322         CDS       T06016                                 
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
vem  Vollenhovia emeryi
Pathway
vem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105563322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vem03019]
    105563322
Messenger RNA biogenesis [BR:vem03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     105563322
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_Vps41 NBCH_WD40 Ge1_WD40 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_HPS5 Tricorn_2nd Beta-prop_NWD2_C eIF2A PROPPIN Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Cytochrom_D1 RMC1_N Beta-prop_DCAF4 MIOS_WD40 WD_LRWD1 Beta-prop_pof12 Beta-prop_DCAF12 Beta-prop_EMC1_N
Other DBs
NCBI-GeneID: 105563322
NCBI-ProteinID: XP_011870215
LinkDB
Position
Unknown
AA seq 327 aa
MYSLIHKTENAHEDSIWTCGWGCPKRKRDIHPDNEDSRDSIRSNEDETAEYLVTASVDDS
VKVWELTDGALKLKHKLTGYSLGVVSIAISSDGSKCASSSLDSSLKLWDLHSGNKLLSIE
VGPVDIWTLVFSPDDKFIVSGSHAGKIHLYGTDNGKQEQTLDTRGGKFTLSVAYSPDGKY
IASGAIDGIINIFDVAYGKVLRTLEGHAMPIRSLCFSPDSQMLLTASDDGHMKLYDVKDA
NLAGTMSGHASWVLGVAFSPDGQQFASSSSDHTVKIWELAQRQCLHTFREHKDQVWSVKY
NPQRNNIIASVSEDKSINLYECPIYDK
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtattctttgatacataaaacagaaaatgcccacgaggatagtatatggacttgtgga
tggggttgtccaaagagaaagagagatatccatccggataatgaggattcacgggactct
atacgatctaacgaggatgagacggcagagtatctagtaacagcttctgtggacgattct
gtgaaagtatgggaactaacggacggtgctttgaagttaaaacacaaattaactggctat
tcattgggagttgtgtccatagctattagttcggacggatcaaaatgtgcttcaagttcg
ctcgattctagtctgaaattatgggacttgcactccggcaataagctattgagcatcgag
gttggccccgtagacatttggaccttggtcttttctcccgatgataaattcattgtatct
ggcagtcatgccggtaagatacatctatatgggaccgataacggtaaacaagaacagaca
ttagacacgagaggtggcaaattcacattaagtgttgcttatagccctgatggtaaatac
attgcaagcggtgcaatagatggtattatcaatatttttgatgttgcttatggaaaagtt
ttgcgtacactggaaggtcacgcaatgcctatcaggtctttatgtttttcacctgattct
cagatgcttcttacagcatctgatgacggacatatgaagctctatgatgtcaaagatgca
aatctagccggaacaatgtcgggtcatgcttcttgggtacttggcgtggctttctctccg
gacggacagcaatttgcatcaagtagttctgatcatacagtcaagatctgggaattagca
caaagacaatgtctgcatacatttcgcgaacataaggatcaggtatggtcagtaaagtat
aacccgcagcgaaacaacattattgcatcagtgtctgaggataaatctattaatttatac
gaatgtcccatatacgacaaataa

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