Vollenhovia emeryi: 105563337
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Entry
105563337 CDS
T06016
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
vem
Vollenhovia emeryi
Pathway
vem03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105563337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vem03009
]
105563337
Ribosome biogenesis [BR:
vem03009
]
Eukaryotic type
Pre-60S particles
RNases
105563337
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Med24_N
Motif
Other DBs
NCBI-GeneID:
105563337
NCBI-ProteinID:
XP_011870235
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MLPSTGYFKTINCPFYDGGSCDRPYCHFKHAKREDAGSAAGVAGVAEAQTAGQAQEDKPA
DMLQHLVTEAVKKVLADQEVTDTEKVSQDIVSQVVEELKPTLSSGSVAAVHTAPSIGKHI
TIPTPITKPVACVYNPTPIAELRKRHIPVASYMPTRETRVAVRRKFLPDGVKPWSSVVQE
SSGSQVTTEVTYKPTAIVSTTVQDEQSYVPTIRSDASSSNSYDDGNSNDYQSKFKEGYYP
KSKKRREEYVPKKIKAPLKTVQQLSDATFNQYEPEFDMMDVIITSNHATSIALDHAKASA
SEDSQDYSLDVEPRFSDDEPMEDASTDERGAKRSEQKENANEKEKENLQRVGLDTADKQT
SNKDNKIHSNHYDVKSDIKSSDRSKPHKASDSRTLSKRREDAARQDADKEQEKRKDRDRS
KERDRRDRRSSEKRDRERSRHKSDSRDKHRSSSSRDKDRRRSSRASKDSSHGSREHSQRH
RHTSPKKERDDHRKSSRRDKQKSSSNSSKSNRHTSSRSDRKHSSESSRRSSDSSRKSGKH
KESSSERNSFDRSDNSVDSIRSFVDDEILELSDSDHDVQEECLKIFQEYEASDYPKLVSV
KKSLKEETENVEEVGRKRVAHPSAATSVTRQLGPSQPPKKLITPQQKMYERWRLMRQAAA
EKAAEKAAEKAAADAKIQVTVTSADQSSSNIAQRVSIHREHESASTISNSDALLNVNGRI
RIAHVPYAKSLAMEKKKVVETAGKSGDAKGVDNKTIAQTMKGGVRVAHIPQVVPQLVRPE
PLQVATQKFPLNVRQYYINVMHDICVQIYTNGDDAAQRAVKEELACHERCKALAVYKNSC
MLAAHRLRKEVDQSKSNEKIAGSSCGMVSHEAVLVGKSKGSWSVVKIKRNVTDFKGPALY
NMLKKWIMSEQQLRDNGFPRKHPDGTKGQAKVYVINSRNQTVLSKVPNERMCSRCGQSYM
IDKQGFAVRQQNCIYHWGRKFTIRGEGKYSCCQQYGSATGCCDAKTHVWDYTDYENLRGY
VKTLSKDVPIDEQGVYALDCEMCYTTQGLELTRVTIIDEDCKVIYETLVKPQNSIIDYNT
RFSGITEEDMMDVTTTILDVQATLLTMFSDKTILVGHSLESDFKALKLLHDTVVDTSVMF
PHKNGYPQKRALKNLSSEYLRKLIQNDVGGHDSKEDAVACMELIRWKVKEEAKLQ
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgttgccctcgaccggctactttaagacgataaattgtccgttttatgacggcggttcg
tgcgaccggccctattgtcacttcaagcacgccaagcgagaggatgcggggagtgcagca
ggagtggcaggcgtggcggaggcccagacagcggggcaggcgcaggaggacaagcccgcc
gacatgctgcagcacctggtgacggaggcagtgaagaaggtgctcgctgatcaggaagtc
accgataccgagaaagtgtcgcaggacatcgtctcccaggtggtggaggagcttaagccg
accctgtcctccggttctgtcgcggctgtacacaccgcgccgagcatagggaagcacatc
acgatccccacgcccatcaccaaaccggtcgcttgcgtgtacaatccgacgccgatagcg
gagctgaggaaacggcacatacccgtggcctcgtatatgccgaccagggagacccgggtg
gctgtgaggcgtaaattcttaccggacggggtcaagccgtggtcgagcgtcgttcaggag
tcgagcggctctcaggtcacgaccgaagttacgtataagcccaccgcaatagtgagcacg
accgttcaggatgaacagagttacgtgccgacgattagatcggacgcgtcctcgtcgaat
tcgtacgacgacggtaactcgaacgattatcagtctaaattcaaagagggatattatcca
aagtccaagaagagaagggaggagtacgtccctaagaagatcaaggcaccgttaaagacg
gtccagcagctgagcgacgccacatttaatcagtacgagcccgagttcgatatgatggac
gtgattatcacttcgaatcacgccacttctatagcgctcgaccatgcaaaagcatcggcc
agcgaggattctcaagattattccttggacgttgaacctaggttctccgatgacgagcct
atggaagatgcgtctacggacgagcgcggcgcgaagaggtctgaacaaaaggagaacgca
aacgagaaggagaaggagaacctccaacgcgtgggactcgacactgcggacaaacaaacg
agcaataaagataataaaatacacagcaatcactacgatgttaaaagtgatataaaaagt
agcgacaggtctaaaccgcacaaggcgagtgattcgagaacattgtcgaagagacgagag
gacgctgcgaggcaagacgcggataaggagcaggagaagcgcaaggatcgggacaggagc
aaggagagagacaggagggatcgccgcagctctgagaagagggacagggagcgatccagg
cacaaatcggactccagagataagcaccgttcctcctccagcagagacaaggacaggaga
agaagcagccgtgccagcaaagactcgtcgcatgggagtagagagcactcgcagcggcat
agacatacttcgccgaagaaagagcgggacgatcatcgcaagtccagccggcgcgacaag
cagaagtcaagctcgaattcgtccaagtcgaatagacatacgtcgagcagaagcgatagg
aagcatagctcggagtcgagtcggagatccagcgactcttcccgaaaatctggcaagcac
aaagagagcagcagcgagaggaattcattcgatagatctgacaattctgtagatagtatc
cgttctttcgttgacgacgagattttggaattgtcagattctgatcatgatgtacaagaa
gagtgcctaaaaatctttcaggaatacgaagcctcggattatccgaaattagtgtcagtg
aagaaatcattgaaggaggaaactgaaaatgttgaagaagtcggtagaaagagagtcgcg
catccgtcggcggccacaagtgtcactagacagttaggtcctagtcagccaccaaaaaag
cttataactccgcaacaaaagatgtacgagcgatggcgtttgatgaggcaagcggcggct
gagaaggccgcagagaaggcagctgagaaagcggcagccgacgcgaagattcaagttaca
gtcacgtcagcagatcagtcttcgagtaatatcgcgcaacgtgtgtcaatccacagagaa
cacgagtctgcttcaacgataagtaacagtgatgcgctgctgaacgtgaatggtcgtatt
cgaatcgctcacgttccgtacgcaaaatccctcgcgatggaaaagaaaaaggtggtagaa
acagcggggaaaagtggggatgctaagggagtagataacaaaacaattgcgcagaccatg
aagggcggtgtacgcgtcgctcatataccgcaagtggtgcctcaactcgtgcgtccagaa
ccgctacaagtcgctacccagaagttccccttgaacgtccgtcagtattatattaatgta
atgcacgatatatgcgtgcagatttatacgaatggtgacgatgcggcgcaacgagccgtt
aaagaagaactcgcgtgtcacgagagatgcaaggcgctcgcggtgtacaagaactcgtgc
atgttagcggctcatagattaaggaaggaagtggatcagagcaaatcgaacgagaagatc
gctggttcgagctgcggtatggtgtcccacgaggctgttctcgttggcaagtcgaaaggt
tcttggagtgttgtcaagatcaagaggaacgtgacagattttaagggaccagcgctctac
aacatgctcaaaaagtggatcatgtcggagcagcagcttagggacaacgggtttccacgt
aaacaccctgatggtacaaagggacaagcaaaggtgtatgttataaattcacgaaaccaa
accgttttgtcaaaagtgcctaatgaaagaatgtgcagccgatgtggccaatcgtatatg
atagataaacagggatttgctgtgaggcaacagaattgtatatatcattggggcagaaag
tttacaattagaggagaaggcaagtacagttgttgccagcaatacggctccgctaccggt
tgctgcgacgcaaagacgcacgtatgggactacacggactatgaaaatcttcgtggttac
gttaaaaccttatcgaaagatgttcctattgacgagcaaggtgtttacgcacttgactgt
gaaatgtgctatactacacaaggcttagaactaaccagagtgacgattattgacgaagat
tgtaaggtgatatacgaaacgttagttaagccgcaaaattcaataattgattacaacaca
aggttttcagggatcacagaagaagacatgatggatgtgacgacgactattttagatgta
caagctacgctcctcacaatgttctcggataaaacgatcttagtgggtcacagtcttgaa
agtgattttaaagcgttaaagctgctccacgataccgtcgtggataccagcgtcatgttt
ccgcataagaatggatatccgcaaaaaagggcgttgaaaaatctcagttccgaatatctc
agaaagctcatacaaaatgacgttggtggtcatgacagtaaagaagatgctgttgcttgt
atggagttaattcgttggaaagtcaaggaagaagcaaaattacagtaa
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integrated database retrieval system
