Vollenhovia emeryi: 105563884
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Entry
105563884 CDS
T06016
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vem
Vollenhovia emeryi
Pathway
vem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105563884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vem03021
]
105563884
03036 Chromosome and associated proteins [BR:
vem03036
]
105563884
Transcription machinery [BR:
vem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105563884
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105563884
PBAF complex
105563884
GBAF(ncBAF) complex
105563884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
105563884
NCBI-ProteinID:
XP_011871237
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MLSLGPKKDGGPNAKFFEAPEILTQLDGVKQWLLKNCKKYVQTDPPTNKSLATLLVQLLQ
FQEDNLGKNVTKPSMTRLPMKCFLDFKPGGGVCHILATAYRFKQEQGWRRFDFPGGKSGS
RMDRTVDMLMAAERALIQNRCITVPSIFVRPDVDKNTAAKVKDVIRKHQGTVVENEADAT
HIIYPPVDPMEEEYARPCMRRERSVLIHWYYFPDSYDSWLTLDLPWDYPEGNYANTNSRS
MYKVSATWALDLEQYNEWMNEEDYEVDDNGQKRIHKYRLSVEDLMAQPSHPPPAKKPKRK
RSPSPPPKLGKRKSSRAPSGIQSASSASSATAPKKSRGGEEEEDLTQGMEDPPAEPRIVE
VVATPTNPPVAGQGNATTGNSTLTTTGSKKQDSELQPLKSGNLTDLDEQMEGDKGSSQGG
QDREERDTSKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNG
KNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINY
QVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKMLLDLEKKPVTVPG
VLGPEEKASAGAMANFGLKIDQYSKKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDD
WNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPIPFSKAGNPVMSTVA
FLASVVDPRVAASAAKAAMEEFAAIKDQVPAALMDQHLRNVQASANSDGKFDPAAGLAQS
GIAGTGPPEPPDDTAASTATTTPSVPAGAASSPHSATAPTPEAKKEEQDKAKDAMEVEPS
QVEVTKKEDESKEGEEDAKSTTDPEAAEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHL
AAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHL
EQLKAAEFRARQQAHQRLAQEQQQQQQQQQQQQQQQQQQQQQNQQHPPWQPPGAQQQQQQ
PPSPQAQVQQQPPPHTPPQQT
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctctaggtccgaaaaaggacggcgggcccaacgccaagttcttcgaggcgccg
gagattctcacgcaactcgatggcgtcaagcagtggcttctcaagaactgcaagaagtat
gtacaaacggatccgcccactaacaagagcttagccacgttgctggtgcagcttctgcag
tttcaggaggacaatctcgggaaaaatgtaacaaagccatctatgactagacttccaatg
aaatgcttcctggatttcaagcctggaggtggcgtgtgccacatactagctactgcttat
cgtttcaaacaggagcaaggatggcggcgcttcgattttcctggtggaaaatcgggatcc
cgtatggatcgtacggtggatatgctgatggcggcggaacgtgctttaatacagaacaga
tgtataactgtaccaagtattttcgtgagaccggatgttgacaagaacacagctgcgaaa
gtaaaagatgtgattagaaagcatcaggggactgtcgttgaaaacgaggcggatgctacg
cacatcatctaccctccagtagatccgatggaagaggaatacgcgcggccgtgtatgaga
cgcgagcggtcggttctgattcattggtactactttccagacagttacgattcttggttg
acactggaccttccatgggactatcccgagggaaattatgcgaacacaaattcaagatcg
atgtataaagtatcggctacatgggcgttagacttagaacaatacaacgagtggatgaac
gaagaagattacgaggtcgacgataacggtcagaaaagaatacacaaatacaggctctcg
gtggaagatttgatggcgcagccatcccatccgccacccgcgaagaaacccaagaggaaa
cgatcgcccagcccacctccgaagctcggcaagcgtaagagtagcagagcaccgtcgggt
atccagagcgcttcttccgcgtcgtcggcaacggctccgaagaaatcacgcggcggcgag
gaggaggaagatctgactcagggaatggaggacccgcccgctgaaccccgtattgtcgag
gtggtcgctacgcccacgaatccaccggtcgcaggtcagggtaatgcgacaacgggcaac
tccacattgacgactaccggtagcaagaaacaagacagcgagcttcagcctctgaaatct
ggcaatttgaccgatctggatgaacagatggaaggagacaaaggaagctctcaaggtggg
caggatagagaagaaagagatactagtaaagaaaggggtgagggtggcaagggcgacgaa
ccggaggacaatgtgacggagcaaacacatcatatcgttgttcccagctactccgcctgg
tttgattacaattcgattcacaccatagagaagcgggctttatcggaattcttcaacggt
aaaaataaatccaagacgccagagatctatcttgcgtatcgaaactttatgatcgacacc
tatcgattaaatccaacggaatatattacatcaaccgcctgcaggcggaatttagccggg
gatgtatgtgcgattatgcgcgtacacgcatttttggaacaatggggactcatcaactat
caagtagacgcagagtccagaccgacgccaatgggacctccaccgacatcgcacttccat
gttctatcggacacgccatccggtttggcaccagttaatccgaatccgccgaagacaccg
cagccctccgccgcaaagatgttgctcgacttggagaagaagccggtgacggtgccgggt
gtcctgggcccggaggaaaaggcctcggcgggcgcgatggcaaacttcggtctgaaaatc
gaccagtactcgaaaaaaccggcggtcctgaagaacaaacaagcggcaggtgccacgcgc
gactggacggaacaagagacgcttctgctgttggaaggattagaattgcacaaggacgat
tggaacaaagtatgcgaacacgtgggctcgagaacgcaggacgagtgtatcttgcatttc
ttacgtttacctatagaggatccgtatctggaagaaggcgggcccgaaggcttgggccca
ttggcttaccagccaataccgttctcaaaagccggtaatcctgttatgagtacggtcgcc
tttcttgcttcggttgtggatcctagagtagccgcgagcgctgcaaaggcagctatggaa
gagtttgctgcgataaaggatcaagtaccagctgcattgatggatcagcatttaagaaac
gttcaagctagcgctaattcagatggtaaatttgatccagcagcagggttggcacaatcg
ggcatcgctggcacaggaccacccgaaccgcctgacgatacagcggcttctaccgcgaca
acgactccgtctgtaccggcgggtgcggctagctctcctcacagcgccacagcgccgact
cccgaagcgaagaaagaggaacaagataaagctaaagatgctatggaggtcgaaccatct
caggtagaagttacgaagaaagaggacgagtcgaaagaaggcgaagaagatgcaaagtcc
accactgatccagaggctgctgaagccaaagagaagaaggacaaggtggtaagggacgct
cagcttcaatccgcggcggcagcagcgctagcggctgcagctgttaaagccaagcattta
gcagctgtggaggaacgcaagatcaagtcattggttgcgttactagtcgaaacgcagatg
aagaaattagagattaagttgcgccacttcgaggagctggaaactacgatggagcgtgaa
cgcgaaggtctcgagtatcagcggcaacagctcatcaccgagcggcagcagtttcacctt
gaacaattaaaggcagccgagtttagggcacgacagcaagcccaccagcgattggctcag
gaacagcagcaacagcagcagcagcaacaacaacagcagcagcagcagcagcagcaacaa
caacagaatcaacaacatccaccctggcaaccgcctggtgcgcagcaacagcagcaacaa
ccgccaagtccgcaggctcaagtgcaacagcagccgccaccgcacacgccaccgcagcag
acataa
DBGET
integrated database retrieval system
