Vollenhovia emeryi: 105564718
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Entry
105564718 CDS
T06016
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
vem
Vollenhovia emeryi
Pathway
vem03013
Nucleocytoplasmic transport
vem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105564718
09122 Translation
03013 Nucleocytoplasmic transport
105564718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vem03019
]
105564718
03041 Spliceosome [BR:
vem03041
]
105564718
Messenger RNA biogenesis [BR:
vem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105564718
Spliceosome [BR:
vem03041
]
Complex C
Other components
EJC/TREX
105564718
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105564718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Csx1_CARF
CbtA_toxin
Motif
Other DBs
NCBI-GeneID:
105564718
NCBI-ProteinID:
XP_011872718
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MASKVWHTELWKSWDKHGKNDFLKLIKHKFKEGNTPEWRRGLYELISNGIHGNVKKDSVV
QTLGELMSFDGSIPSAIVDIITLIDAEVHNEERNNFYCIVKESEKFLPDRLLKERLEIET
LQDVGTLKNKNFQTKFIKVKTKLYYKQRKFNLFREESEGYSKLVVELNQERPDSEVASTL
EIVKSLIGYFNLDPNRVLDILLETFENRPQDDALFIPLIRSYMSDQQVLCEVLGFKYCST
INTTPFSLQKVTALMLQHGVIKLDDILPWLVPDDKTIISDHEQVMKQAKEYVRKLSVIST
KDKEEVVEEKENAQDKYASNQKFGLCEALLEIGAWEVAQSLFNRLPDYCFTDQRPIALAL
CKMIQSLIELVYRKHCIVSPKLPGRKVPPLKSTLAPPSLRDLEDIHNYLLPMLIVLGPNL
HQDPILMYKVMRLCYAAIKHCPLDASKQPLNKNCSLYYDVLTILDVALLPSLSFMDCNCC
VAEELWNILKYYPYQNRYCLYARWKNDTPLQHAALLRKRADAQKKIKSIMKRVSKETIKP
VGRSIGKLTHSSPGVLFDYVLIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVEALAGA
DRDRFKHDGTSISLWLQSLASFCGAIFKKYNIELTGLLQYVANQLKAQKSLDLLILKEIV
QKMAGIEAAEEMTSDQLDAMAGGDLLKNEAGYFSQVRNTKKSSQRLKEALSEHSLAVALC
LLMAQQKHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVDRLPSIHSM
LQDNHIHADVAFFLARPMFAHAINIKYDALRKADPNYKKMSTAMKQLKYAEAAQAVMAPV
AQSVRPLHPLKVWEDISPQFLVTFWSLSMYDLYVPVESYQREISKLKQLAAQTADSKDLN
VSKGKKEQERYTTLIEKLQDEKKKQDEHVEKVFAYLRQEKDTWFLSRSAKSAKNETITQF
LQLCLFPRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEAN
RYGRFLCAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVCH
KWHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLAKLSQILERKVEKVREEERGQ
RQDLHVLATSYSGQLKAKTPSMIRESDFHYVGDKAGKTQQDTTSSETSEKVSNGVAVKEN
NNGDARPEKENKEQREKRSSSNQTHHENSEKFRKKEDSKDVLEAKEKYVKKEEVKDDEGL
DKKDRKYYKEEHYYSGGVDNLDRDLSSVSNSSASSGPTPEGPERVPDVKRRKVESAPKQE
GRRTEAVLDKKERSSKGKARDEQKELRREKKQGRKRDRAEESIATTEQKRRKDDERAKGT
HQNGDIPEHREKHHYSKVSNINLALFMMILLNGSTSIQNVLDCFFPLEFFDFCFVNFRLH
FDYFYFSLLTCFLLKFVVIYIRRKNI
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaagtatggcatacagaattgtggaagtcatgggataagcatgggaaaaac
gatttcctcaagcttatcaagcacaaatttaaggaaggcaacacaccagaatggagacgc
ggattatacgaattaatatcaaatggaatccatggaaacgtaaaaaaggacagtgtagtt
cagacactaggtgaacttatgagtttcgatggctccataccatctgcaatagtagacata
attactttaattgatgcggaggtgcacaatgaagaaaggaacaacttttactgtatcgtg
aaagagtctgagaagtttttgcccgatagactgttgaaagaacgtttagagattgaaact
ttgcaagatgtagggacgttgaaaaacaaaaactttcaaaccaagtttataaaagtaaaa
accaagttgtattataagcagaggaaatttaatttatttcgtgaagagagcgagggttac
tccaagctcgttgtagaattgaatcaggagcgtccagacagtgaggtggcgtcgaccctg
gaaattgttaaatcccttatcggttatttcaatcttgatcctaatagagtactcgacatc
ttactagaaacttttgaaaatcgaccgcaagacgacgctctatttattcccttaatacgt
tcgtacatgagcgatcagcaggtactttgtgaggtgttaggattcaagtactgctccacc
atcaacaccacgccgttctcgctgcagaaggtcaccgcgctcatgctgcagcacggtgtg
atcaaactggacgacatattaccttggctagtgccagacgataaaactatcatatcagat
catgagcaggtaatgaagcaggccaaggaatacgtgcggaaattgagcgtgatctcgacg
aaggacaaagaggaagttgtagaagagaaggaaaatgcacaggacaagtacgcgagcaat
caaaagtttggattatgtgaagcgcttctggaaattggagcttgggaagtggcacaaagt
ttattcaatcgcttaccggactactgttttacggatcaacgccccatagctctagcattg
tgcaaaatgattcagtctcttatcgaactggtgtacagaaagcattgtattgtctccccc
aaattaccgggtcgtaaagtgcctccgttaaagagtaccctcgcgccgccgtcgttacgc
gatctggaggacattcataactacttgctgccaatgctgatcgtacttggtccgaatcta
caccaggatcctattctaatgtacaaagtgatgagactgtgttacgccgctatcaagcac
tgtccgcttgacgcgagcaagcaaccattgaacaagaactgcagcctctactacgatgta
ctgacgatactcgacgtcgcgctgctaccatccctgtccttcatggactgcaactgttgt
gtcgccgaggagctatggaacatcctcaagtactatccctatcagaatcgctattgcctg
tatgcgcgctggaagaatgacacgccgttacagcatgccgcattgctgcggaaacgtgcg
gatgctcaaaagaagatcaagtcaatcatgaagcgcgtgagcaaggaaacgatcaagccg
gttggccgttcaataggcaagcttacgcattcctcaccgggtgtattattcgattatgtc
ctaatacagatccagttgtatgacaacctgataggacctgtggtggactccttaaaatac
ttgacaaacatctcgtacgatgtgttggggtattgtctcgtggaggcattggcaggtgcc
gacagagacagatttaaacacgatggtaccagtatatccttgtggctgcaatctctggct
tctttttgcggggcgatatttaagaagtataacatcgaattaacagggttgctacagtat
gtagcaaatcaacttaaagctcaaaagagcctagatctattaatattaaaagaaatagta
caaaaaatggctggtatcgaggcggccgaagaaatgacgtctgatcaactggatgctatg
gcaggcggagatctgttgaaaaacgaggccggttactttagtcaagtccgcaacacgaag
aagtcctcgcagcgtttaaaggaagctctctccgagcacagtctcgcggttgctctgtgc
ttattaatggcacagcagaaacactgcgtcgtttatagagagacagataaatctcatttg
aaactcgtcggcaagttgtacgatcagtgccaggatacgttggtgcaattcgggactttc
ctgggctcgaccatgacggtggacgaatatgtggaccgattaccctcgatccattctatg
ctccaggacaatcacatccacgcggatgttgcattctttctggcgcggccaatgtttgcg
catgccataaatataaaatatgatgctcttcgtaaagctgatccgaattataagaaaatg
tccacggctatgaagcaattaaagtacgcggaagccgcgcaagccgtcatggcacctgtc
gctcagtccgtcaggccattgcatcctctaaaagtttgggaggacatatcgccgcaattc
ttagtcacattttggtctctatcgatgtacgatttgtacgtgccagtggaaagctatcaa
agggaaatcagcaagttgaagcaacttgcagcgcaaaccgccgattccaaagacctgaat
gtaagtaaaggaaagaaagaacaagaaagatataccactcttatcgagaagctacaggac
gaaaagaagaagcaagacgaacatgttgaaaaagtttttgcgtacctgagacaagaaaag
gatacatggtttttgtcacgaagcgctaagtctgcgaaaaacgagacgataacgcaattt
ctacagttgtgcctattcccgcgatgtacattcacaactgtggacgccatgtactgtgcg
aaatttgtacataccatccactctctgaagactgcaaatttttcaactcttctttgctac
gatcgtcttttctgtgatattacatattcagtcacttcgtgcacagagaacgaagcaaat
cgatatggcagatttttatgcgccatgctggaaactgtgatgcgatggcattccgagaaa
gccatatttgataaggaatgcagtaattatcccggtttcgtgaccaagttccgtgtgagc
aatcaattttccgaagcgaatgacatggtcggatttgaaaattatagacacgtgtgtcac
aaatggcactataagatcacaaaggctattgtggtgtgtctagattctaaggattatgtg
caaataaggaattctttgataatattgataaagatattgccacattttcctgtcttggca
aaactctctcagatccttgaacgtaaggtggagaaggtgagggaagaagagcgtggtcag
cgtcaggacttgcacgttttggccacatcatacagcggacagttaaaagctaaaactccc
agtatgatacgcgaatcagacttccactatgtgggcgataaggctggtaagacacaacaa
gatacaacgagtagtgaaacgagtgaaaaagttagtaatggagtagcagtgaaggaaaat
aacaacggagacgctcggccggaaaaggaaaacaaggagcagcgagaaaagcgaagttcc
tctaatcaaacgcatcacgaaaactctgagaagtttagaaagaaggaagacagtaaggat
gttttggaagcaaaagagaaatacgtgaaaaaagaagaggtgaaagacgatgagggatta
gataaaaaggatcgcaaatattataaggaagagcactattatagcggtggtgtagacaat
ttagaccgagacctttccagtgtgtcaaatagtagtgctagttcgggtcctacaccagaa
ggtcctgagagagttccagatgtaaaaagaagaaaagtagagagcgctccaaagcaggaa
ggaagacgcacggaggctgttctcgataagaaagaacgttccagtaaagggaaagcacgc
gacgaacagaaagagttgcgtagggaaaagaaacagggacggaaaagggatcgagcagag
gaatccatagcaaccactgaacaaaaacgaagaaaagatgacgagagagccaaaggcaca
catcaaaacggtgacattcctgaacatagagaaaagcatcattacagtaaggtcagtaac
atcaatttagcactttttatgatgatattattaaacggttcaacttctattcaaaacgta
ctcgactgtttctttcctcttgaattctttgatttttgtttcgttaattttcgtttacat
tttgattatttctacttttctctgcttacttgtttcttattgaaatttgttgtaatttac
attaggcggaagaatatctag
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integrated database retrieval system
