Vollenhovia emeryi: 105564872
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Entry
105564872 CDS
T06016
Name
(RefSeq) uncharacterized protein LOC105564872
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
vem
Vollenhovia emeryi
Pathway
vem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105564872
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vem04990
]
105564872
Domain-containing proteins not elsewhere classified [BR:
vem04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
105564872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
105564872
NCBI-ProteinID:
XP_011872999
LinkDB
All DBs
Position
Unknown
AA seq
1929 aa
AA seq
DB search
MAQLISVKLSRFDGSPWGFRLQGGKDFGTPLVVQKVNSGSPAEAAGLKAGDAVIRVNTTD
MYNLRHKDAQDVIVKAGNNFEITVQRGGSTWKPHVTPATTSLPPPMHTAPASNIAPVTKT
SLAAKKQDGPLIGTGHNFSPKPFLNGTGDGSIKSIVNKQYNSPVGIYSEETIAETLSAQA
EVLAGGVLGVNFKKNEKNYNAQNSEVFKMVQEADKEPKTPEPVSSRTEFYSSVSHAVGGR
ATSSRSPTPMFHAMGGGGSAPADRHFVWMDESYERNREPQPQKQESSAGSGSSTPGGVVC
SNCDRVIVGVFVRIKEKNLHVECFKCSTCGTSLKNVGYYNINNKLYCDIHAKLVARQNAP
SGLVPITIPPGGKAPASTISAALANAPLSPPLSNHGSSPQPFSACNRTSPDSGFHHTWRS
TSNTNGCIRNGECNGELKTFTSTITIQTGGTEPTTRLGIPPIDSPSLRSVQAPTSNSFIG
PKPFGGSSGFSSNLSPTPTLNSGSSTLPRPQSQTVTETSNSETYERSCYYEIVESTKNQA
SRPDSVKSRRSLVWPPSKPIEDITYPTASPLYINPNPVLDKRCHQIKEKRASIEACERAL
SHRTERHRSESIDREVERVLKGYGRRQEIDAMDRISCPGQPVYRRVDLVDTGSRTSRSDV
VTSRPSSTDSVRRSLTPTRIVQPIPKPWTATVSNGGTNLYQQSYAIPPPQEQPAGQVCKK
FMREVCHRERISGGKEHREEQRAYRTEICRREQTICPKPPLPAPKQEQPSETVKEIDTEV
IDLRGDETDEVDVSKGIQGEHDLITETAEETVDGMHTKQSATFEKTVERVSSPIEKPSAS
MIEEAEDKTESQCFARRTETHINREVGDTVERTVEESAEMVTSAVDAQQMLEKAKEEEEE
RKREEEEEERRKEEEERRKREEEERRRQEEEEKRKREEEEKIKKHVTFNEEDEEVEEVRE
QPLGRTVVREERITESEGSTPGRCKITKETYEEITEEVLVQERVRRKGAVEDERRKSLRE
QVEVHQSLRDQQAPERRSVVAKYGQQPQETMETCKKKVQFLKETETGPKPLSDTPVKNST
PKEWKSEMVNALTTASDRSYTPLNATSSVKELYTEETIYLDHRCRPKPPPPKEEIRPISP
FQQALTIAPERCYTPLSREIGPEDQQIANRAQTPNLQTQTNSYCPPLDILYGKEGTTRES
YAREQMCVRKEIKESRPRPLPTPPPDHRLRDSSASPAARPRPETPKSSKSFTAGLKKPDA
IPSYQKYLVAMRKEPIESQPFVPSRTPTPTPGRSKSPAQGPPEPPACYVKAQAPRVREDP
PPSKRGGSVHFPSRKTISYNVEEDTDSGHRKQEYSASRSVNYDEKETSSLDAGPTDALYA
QFQETRCMTSEETSEQENTATHVKKALQVFEDYEKCEQKEILPPQNPKPSVCAIDKISYT
KPTLSCPMTSSAPARQPIYSSSTEVRHVRYDTPSPKPCSETGVTVLPCKAHSDQGIKAGV
VVVPCDGSQTTCPRSGICVTATKDRSGVCVSPSFGMRPGTCGQPSGTCGRESSCDFNISN
CPDSDICIAPCADGSVCVAPCKKPGPKQSKANLPFPQIPLPYEEISPPTPQCSAPGFKPR
TNLSGQLARLTAKNGQSSVPVVQLYKPTQTPQTQSYTENTYYHTQSYRETHCEPGKHCQN
TQNRCQDQIHCDTFSKTQNLVDPPNLSSHPDLGTGIGGLGSAGSKSGSFAGSSAPKRGRG
ILNQAVGAGSRIPLCAHCNSYVRGPFITALGQIWCPDHFVCVNAQCRRPLQDIGFVEEKG
QLYCEYCFEKFIAPSCNKCNNKIKGDCLNAIGKHFHPECFNCAYCGKLFGNSPFFLEEGL
PYCEADWNELFTTKCFACGFPVEAGDRWVEALNNNYHSQCFNCTMCKKNLEGQSFYAKGG
RPFCKNHAR
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggcacaactgatcagtgtcaagctgtctaggttcgacggatccccctggggcttccgt
ctgcaaggcggcaaggatttcggcacgccgctcgtcgtgcagaaggttaatagcggttct
ccggcggaagctgctggtcttaaagctggcgacgcggttatcagagtcaatactaccgac
atgtataatctgaggcacaaggatgcgcaggatgtcatagtcaaagccggaaataatttt
gaaataactgttcaaagaggcggtagtacctggaaaccgcatgtgacgcccgcaaccaca
agcctgccgcctccgatgcacaccgcgcccgcgagtaacatcgcgccggtcacaaagacc
tctttggcggcgaaaaaacaggatggacccctcatcggcaccggacacaacttcagcccc
aagccattcctaaacggcaccggcgacggttcaatcaagtccatcgtgaacaaacagtac
aacagccccgtggggatctacagcgaggagacaatcgcggagacactgtccgctcaagcg
gaggtccttgctggaggtgtccttggggtgaatttcaaaaagaacgagaagaactacaat
gctcagaatagcgaggttttcaaaatggtccaagaagcggacaaggagccaaagacccca
gagcccgtttcttcaaggacagagttttactcctcggtgagccacgcggttggcgggagg
gccacttcatcgaggtcacctacgccaatgtttcatgctatgggcggtggtggtagcgca
cctgccgataggcactttgtttggatggacgaatcgtacgagaggaatcgggagccgcaa
ccgcaaaagcaggagtcttccgccgggtcgggctcgtcgacgccgggcggggtcgtttgt
agcaactgcgaccgagtgatcgtaggtgtgttcgtcaggatcaaggagaagaacctccac
gtggagtgcttcaagtgctcgacctgcggcacatccttgaagaatgtcggttattacaat
atcaacaataaattatactgcgatatccacgcgaaactcgtcgccaggcaaaatgctccg
tctggtcttgtgcccatcactataccaccaggtggcaaagcaccagctagtaccattagc
gcggcattggcgaatgcacctttatcgccacccctcagcaatcatggatcgtcgcctcag
ccattctccgcgtgcaatcgtacgagccccgattccggattccaccatacgtggcgatcg
acttcgaacacgaacggatgcatcaggaacggcgagtgcaacggcgagttgaaaacgttc
acgagtacgatcaccatccaaacaggtggcacagagcccaccacccgccttggcatcccg
cccatcgattcacccagcttacgatcagtccaggcaccaacgagcaacagtttcattggt
cctaagccgttcggtggatcgagtggattttcatcgaatctatctccgactccgacattg
aattccggcagcagtaccttaccacgtcctcaaagccagactgtgacagaaacctccaac
agcgagacttacgaaagatcctgttattacgagatcgtggaaagcacgaagaatcaggcc
tcccgtcccgactccgtaaagtcccgccggagcctcgtttggccaccctcaaagcctatc
gaagatatcacatatcccaccgccagtcccctgtatatcaatccgaatcctgttctcgac
aaaaggtgccatcagatcaaagagaaacgtgccagcattgaggcttgcgagcgagcttta
agtcatagaaccgagaggcatcgaagcgaaagcatcgatcgagaggtcgaaagggtattg
aaagggtacggtcgtcggcaagaaattgacgcgatggatcggataagttgtcctgggcaa
ccggtataccggcgtgtagatttggtagacacaggcagtagaacttctcgatcggatgtg
gtaacctcaaggccaagttcaaccgacagcgtccgcaggtcgctgacgcccaccagaatc
gttcaaccgattccgaaaccttggaccgcgaccgtcagcaacgggggtaccaatctttat
cagcagagttatgcaataccgccaccgcaggaacagcctgcgggacaggtttgcaagaag
ttcatgcgggaggtttgtcaccgagaacgtatatcgggcggcaaggaacatcgggaggaa
caacgagcttatagaacagaaatctgtcgaagggagcaaacgatttgtccgaaaccgccc
ttgcccgcacctaagcaggaacaaccatcagagacagtcaaagaaatcgacacggaggta
atcgacctgaggggtgacgagaccgacgaggtggacgtttcgaagggaattcagggcgaa
cacgatctcatcaccgagacggctgaagagacggtggacggtatgcacacgaagcaatcg
gcaacctttgagaaaaccgtggagagagtatcatcaccgatagagaaacctagcgcgtcg
atgatagaggaagcggaagacaaaacggagtctcagtgtttcgcgagaagaaccgagaca
catatcaaccgagaagtgggggacacagtggaacgaactgtcgaggaatccgccgaaatg
gttacgtcggctgtcgatgctcagcagatgttagagaaagcaaaggaagaggaagaggaa
agaaagagagaagaagaagaggaagagcgaagaaaagaagaagaagaaagaaggaagcgt
gaggaagaggaacgaagacgtcaggaggaagaagaaaagaggaaacgagaagaggaggag
aagatcaagaagcacgtgaccttcaatgaagaggatgaagaagtcgaagaagtgcgagag
cagccattgggcaggacagtcgtgcgagaagaacgcatcacggaatcggaagggtccact
ccgggacgctgcaagataacaaaggagacatacgaagaaatcactgaagaagtgctggtt
caggaacgtgtgagaagaaaaggagccgtagaagacgagcgtagaaagagcttgcgtgaa
caagtagaggtccatcagagcctccgggatcaacaggcgccggagagacggagtgttgtc
gcaaaatacggacagcagccccaggagaccatggagacgtgcaagaaaaaggtgcagttc
ctgaaagagacggagaccggtccgaaacctctgtcagacacgcctgtaaaaaattccacg
cccaaggagtggaaatccgagatggtaaatgctttgacaaccgcatctgatcggtcgtac
acgccgttaaacgctacgtctagtgtgaaggaactctacaccgaggagaccatctatctg
gaccacaggtgtcggcccaagccaccgccaccgaaggaggagattcgaccgatttcgcct
ttccagcaagcactgacgatagcacctgaacgatgctatactcctttgagtcgcgaaatt
ggaccggaagatcaacagattgccaatagagcgcagactccgaatcttcagactcaaacc
aacagctattgcccgccattagatattttatacggtaaagagggtacgacgagagaatct
tatgcgcgagagcagatgtgtgtcaggaaggaaattaaggaatcaagaccgcgacctttg
ccaactccaccaccggatcaccgtctgagagactcttcggcatcgcctgccgcgagacct
cgaccagaaacgccaaaatcatccaaatctttcacagctggtctgaaaaagccagacgcc
ataccgtcctatcagaaatacttggtggcgatgagaaaggaacctatagagagtcagccg
ttcgttcccagtagaacgcctactccaacgcctggcagatccaaatcgcctgctcaagga
ccacccgagccgccagcttgttacgtgaaggctcaagccccaagagttcgagaagatcca
ccaccatcgaaacgcggcggatcagtgcatttcccctcgcgaaagaccatctcttacaac
gtggaagaggataccgatagcggtcacagaaagcaggaatattccgcttcgagatctgtc
aactacgacgagaaggagaccagcagcctcgacgcgggcccgacggacgcactttatgcc
cagttccaggaaacgcgatgtatgacgagtgaagagactagcgagcaggagaatactgcg
acccacgtgaagaaagcgcttcaagtattcgaagattatgagaaatgcgagcaaaaagag
atattaccgccgcagaatccgaaaccaagcgtctgtgccatcgataagataagctatacg
aagcccactttgtcttgtcccatgacatcatctgcgccagcgagacagccgatctacagc
agttccaccgaagtacgtcacgtgcgatatgacacgccttcaccgaaaccttgttcggaa
acaggagtgaccgttctgccatgcaaagcgcattccgatcagggaatcaaggccggcgtc
gtcgtggtgccctgcgatggttcccagactacttgccctagatccggaatctgtgtgaca
gccacgaaagatcgatcgggcgtgtgcgtgtcgccttcgttcggtatgcgacccggtacc
tgcggtcaaccatcaggtacatgcggtcgcgaatccagctgcgacttcaacatctctaac
tgtccggattctgacatctgtatagctccgtgtgccgacggttccgtctgcgtggcacct
tgcaagaaacctggtccgaaacaatccaaggcaaatcttcccttccctcaaattccactt
ccctacgaggaaatttctccaccgacccctcaatgttcagctcccggcttcaaacctcgc
actaatctgagtggtcagcttgcgcgattgaccgccaagaacggccagtcaagtgtgccc
gtggtgcagctttacaagccgactcagactcctcagactcagagttataccgagaatact
tattaccacactcagagctaccgcgaaacccactgcgaacccggcaagcattgccagaac
actcagaaccgctgccaagaccagatccattgtgatacctttagtaaaacccagaattta
gtagacccaccaaatttgtcgtcccacccggatctaggtactggaatcggtggcctcggc
agcgcgggttccaagagtggatcgttcgccggtagcagcgcgcccaaacgtggacgaggt
atcctgaatcaggctgtcggagcgggatcacgtatacccctatgcgctcactgcaattca
tacgtcagagggcctttcatcaccgctttgggccaaatctggtgccccgatcatttcgtc
tgcgttaacgcgcaatgccgtcgtcctcttcaagacatcggctttgtcgaggaaaaagga
caactctattgcgagtattgtttcgagaaattcatcgcgccttcgtgtaacaaatgcaac
aacaagatcaagggcgattgtttgaacgcgattggaaagcacttccatcctgaatgcttc
aattgcgcttattgtggcaagctcttcggtaacagtccgttcttcctagaggaaggattg
ccgtactgcgaagctgattggaacgaactgtttactacgaaatgcttcgcgtgtggattc
ccagtcgaggctggcgaccgttgggtagaagctctgaataacaactatcacagccagtgc
ttcaactgcacgatgtgcaagaaaaatctcgagggccaaagcttctacgcgaaaggcggt
cgtcccttttgcaaaaatcacgcgcgttaa
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