Vollenhovia emeryi: 105564943
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Entry
105564943 CDS
T06016
Name
(RefSeq) nuclear pore complex protein Nup88
KO
K14318
nuclear pore complex protein Nup88
Organism
vem
Vollenhovia emeryi
Pathway
vem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105564943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vem03019
]
105564943
Messenger RNA biogenesis [BR:
vem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105564943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
105564943
NCBI-ProteinID:
XP_011873119
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MSSCTDLLRLNEKTLFRDIKASLPSGAKETRNILEIRDNAVYVWNADKCCVLTLNVAATR
GKLGEDVPYQTLQPTDPPIFEVANLLINETATQLALWGKLGVALLDLPKRWGKDAVYEGG
KEEILCTNHNFGDFGTTTEIQRARWHPGSTNDSHLLILTSENSFRLYECELGGAPRLIKR
WKVGRGPSNSPSKIPDFTSLGETAVDFDFVTPTLRKPEIFADKSVEITEAISWNQIEWPI
LVLRGNGEVLIVRGNILLENYENPVVLGSLSMYPSTDDNYGIDSCSIMCLQTTPPIVVIA
MCTGKIYHAILLCEISDDDDDDRKTWSQYGSNYSLHTPDNALYVYECVELELGLLFTDDD
KKYNCPIHLHCDKDNKSRYFCSHNAGIHMVSLPMVSQLEEFLCDNSGNYLPSLLNQSILQ
YLFSTRTKHTNVDEPTPMLGFGLLQEPCILVALLHTGVVIDLSVIDLYYLPRIEQFEPVI
NTTNKVNKEPFDVYIKKLLRREVSQPITKIGSRSMSLSESLELLYHATNIFRTQHFVRHD
KVREEIGKKVRALKALKSHLLKEVDTLMETKKELRQTAERLAERYEDINDKQKELARRAE
EVLRLVNYKEPSMTSIERAEAEDLKKMDVKIHDMQIRLEQLKKKSAQQTSHTNGIEANGK
KKEIVFTRNQEEATKENLHQMTKNIKNLVDHVKQIKAEISLSYISKQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtgcacggacttgttgcgcctcaacgagaagacgctgttccgggacatcaag
gcgagtctgccgagcggcgccaaggagacgcggaacatcctcgagattcgcgacaacgcg
gtgtacgtgtggaatgccgacaagtgctgcgtgctcacgctcaacgtcgcggcgacacgc
ggcaagctcggcgaggacgtcccgtatcagacgctacaaccaacagatccgccgatattt
gaagtcgcaaacttactgataaacgagacagcgacgcaactggcactatggggcaagttg
ggcgtcgctctcctggatttgccgaaacgatggggcaaggacgccgtttacgaaggcggc
aaagaagagattctttgcacgaatcacaatttcggcgacttcgggacgaccacggagatt
caacgagcgcgatggcatccgggctctacgaatgattctcatctgttgattttgacatct
gaaaattcttttcgtttatacgaatgtgaactgggcggcgcaccaagacttataaagcgc
tggaaggtcggtcgcgggccgtcgaactcaccctcaaagatcccggactttacatccctc
ggcgagaccgcggtggacttcgatttcgtcactcctaccctgaggaagccggaaatattc
gccgataagagtgtcgagataacagaagcgataagctggaatcagatcgagtggccgatc
ctggtgctacgcggaaacggcgaagtactgatcgttcgtggaaacattttattggaaaac
tatgaaaatccagtggtactgggttcgttgtccatgtatccgtcgaccgacgataattac
gggatagattcatgctctatcatgtgcctgcaaactaccccgccgatagtggtcatcgcc
atgtgcaccggaaagatttatcacgcgatactgctgtgcgaaatatcggacgatgacgac
gacgacagaaagacttggtcgcaatatggctcgaactatagtcttcatacaccggacaat
gcgctttacgtttacgagtgcgtcgaactggaactgggtcttctctttaccgatgacgat
aagaaatataattgtcccatccaccttcattgcgataaggacaacaaatcgaggtatttt
tgttctcacaatgccggaattcacatggttagtctaccgatggtttctcaattggaagag
tttttatgtgataacagcggaaattatctaccttctctgttaaaccaatcaattttacaa
tatttattttccacgagaaccaagcatacgaacgtagatgaacctacgccgatgcttggt
tttggcctccttcaagaaccctgtattttagtcgcattgctgcatacaggtgttgtcatc
gatctatcggttatagatctttattatcttcccaggatcgagcaattcgaacctgtaatc
aacacgacaaataaggtgaataaggaaccattcgacgtatacattaagaaattactaaga
cgcgaagtatcacagccgataactaaaataggatctcgctcgatgtccttaagcgaatcc
ctagagttgttgtatcacgctacgaatatctttcgtactcaacattttgtccggcacgac
aaagtccgggaagaaatcggtaagaaggtccgcgctttgaaagcattgaaaagccatctg
ttaaaagaagtcgatactttaatggaaacgaagaaagaattgcgacagaccgctgagcgt
ttagccgaacgatatgaagatattaatgataaacagaaagaattggcacgtagagcagag
gaagttttaagattggtaaattacaaagaaccttcgatgacgtctattgagcgagcagag
gccgaagacttgaagaaaatggacgtaaagatacacgacatgcagatccgacttgaacag
ctcaaaaagaaatccgctcaacagacttcacacacgaatggcatcgaggccaatggaaag
aagaaagaaattgttttcacacgcaaccaagaggaagcgacaaaagagaatcttcatcag
atgacaaagaacataaagaatttagtagatcacgtaaaacagattaaagcagaaattagt
ctatcgtacattagcaaacagtaa
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