Vollenhovia emeryi: 105565124
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Entry
105565124 CDS
T06016
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
vem
Vollenhovia emeryi
Pathway
vem03022
Basal transcription factors
vem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105565124
09124 Replication and repair
03420 Nucleotide excision repair
105565124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vem03021
]
105565124
03400 DNA repair and recombination proteins [BR:
vem03400
]
105565124
Transcription machinery [BR:
vem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105565124
DNA repair and recombination proteins [BR:
vem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105565124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-UDP
zf-C3HC4
zf-RING_2
zf-P11
zf-C3HC4_2
zf-RING_4
TRAF3_RING
zf-RING_6
Dynactin_p62
RSC4_Ig_like
Motif
Other DBs
NCBI-GeneID:
105565124
NCBI-ProteinID:
XP_011873450
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MDDQACPRCKTTKYRNPSLKMMVNVCGHTLCESCVDLLFLKGSGSCPECKIPLRRTNFRI
QMFEDSMVEKEVNIRKRILRDFNKKEEDFATLREYNDYLEEIETIIYNLANNIDTIEMNK
KIEQYKKDNKEQIAKSKLKLGRNEYELEEMIELERQKEEERRIEFVKEEVEAKKKKIREK
EALIDELMFSDANAKNIVESFTTAIQAQKKEAKAAQAATVRATQFSTGIKFGNQGNQNYS
VPKIEEGPLYTYTPIRQQVEGPSPPNWRELQARGYVSHIRNECQMERAGGFRAHVACLRA
LQEAMAGLYHNPSQRQAEFATV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcaagcgtgcccgcggtgtaagaccaccaagtaccggaatccatcactgaag
atgatggtgaacgtctgcggccacacattgtgcgagagctgcgtggacctgctctttttg
aaaggctccgggtcctgtccagaatgcaagattccactgaggcgaacgaactttaggatt
caaatgttcgaggattctatggtggagaaggaagtgaatataaggaagcgtatcctacgg
gattttaataagaaggaggaggactttgccacattaagggagtacaacgattatttagag
gaaatcgagacgataatatacaacctggccaataatatcgacacaattgagatgaacaag
aagatagagcagtataaaaaggacaacaaggagcaaatagcgaagagtaaactgaagctt
ggcagaaacgagtatgaactggaggagatgatagaattggagagacagaaggaggaggaa
aggaggatagagtttgtcaaggaggaggtcgaggcgaagaagaaaaagattcgcgagaag
gaagcgctgatcgacgagctgatgttctccgacgcgaatgcgaaaaatatcgtcgagtcg
ttcactaccgcgatacaggcccagaagaaggaggcgaaagctgcccaagccgccaccgtt
agggcgactcagttcagcacgggaattaaatttggtaatcagggaaatcagaactactcg
gtgccaaagatagaagaggggcctctctacacttacacgcctatccggcagcaggtggaa
ggcccgtcgccgcctaactggcgagagcttcaagctcgcggatacgtctcgcacatacgt
aacgaatgtcagatggagagagcgggtggattcagagcacacgtcgcgtgcctacgagcg
ttgcaggaagcgatggccggcttgtatcacaatccatcgcaacggcaagcggaattcgcg
actgtatga
DBGET
integrated database retrieval system
