Vollenhovia emeryi: 105565195
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Entry
105565195 CDS
T06016
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
vem
Vollenhovia emeryi
Pathway
vem04120
Ubiquitin mediated proteolysis
vem04137
Mitophagy - animal
vem04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105565195
04120 Ubiquitin mediated proteolysis
105565195
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105565195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vem04131
]
105565195
04121 Ubiquitin system [BR:
vem04121
]
105565195
03029 Mitochondrial biogenesis [BR:
vem03029
]
105565195
Enzymes [BR:
vem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
105565195
Membrane trafficking [BR:
vem04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
105565195
Aggrephagy
Other aggrephagy associated proteins
105565195
Xenophagy
Other xenophagy associated proteins
105565195
Ubiquitin system [BR:
vem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
105565195
Mitochondrial biogenesis [BR:
vem03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
105565195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
105565195
NCBI-ProteinID:
XP_011873579
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MSYWFNLVKSAFLGMLRIFWSSKRKISNSLSIYIKTNTGNTLAVELDPKCDIKNLKEIVA
PRMGMAPEDIKIIFAGKELHNSTIIEECDLGQQSTLHAVRTPLRKMLNEMKGTASPIEES
LSEASSFNDSGGKPMNETLMDLSLDESDRGNLSSKVQQENRAHFYVYCSAPCKEVTVGKL
RVKCARCGSGAVTVDRDPQCWPDVLQPTRITVHCESDVCPVTASASSDEADNQVSYARFY
FKCAQHPSLGENDQAVPLYLVKPNLRNIPCLACTDIRETVLVFPCEAGHVTCLDCFREYC
TVRLDERQFQFDTTDGYYTLSCPAGCSNSFIRQVHHFHLLNTEQYERYQRFGAEEHVLRA
GGLLCPRPNCGMGIIPPSAEDAECRKIQCIGGCGYVFCRICLQGYHVGECESQSLETSTS
GFSSRNYSIDPARANEAKWEEASKKAIQLSTKPCPKCRTPTERDGGCMHMVCTRAGCSYH
WCWVCQTEWSRECMGNHWFG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagctattggtttaatttggtgaaaagcgccttcctcggaatgttgcgaatattttgg
tctagcaaacgaaagatatccaactctctaagcatatacattaaaacgaatacgggcaac
actcttgccgtcgaattagatccaaagtgcgacataaagaatttaaaggagattgtcgcg
cctcggatggggatggcaccggaagatattaaaattatattcgcgggtaaagagctgcac
aattcgacgataatagaggagtgcgacttgggacaacagagcactttgcacgcggtaagg
acgcccctgcgtaaaatgctgaatgaaatgaagggtactgcgagtcctatagaggagtcc
ctgtcagaggcctccagtttcaacgacagtggtggcaagcctatgaacgaaacacttatg
gatttatccttggatgagtcggaccgaggaaatttgtcctcgaaagtgcagcaggagaat
cgggcacatttttacgtatactgttcggctccctgtaaggaggtgacggtaggtaaattg
agagtcaagtgtgcgaggtgcggcagcggcgctgtaaccgtcgatagagatcctcaatgc
tggccagacgtgttgcaaccaacaagaatcacggtacattgcgagagcgacgtttgtccc
gtaactgcgagcgcatctagcgacgaggccgataatcaagtctcttacgcacgcttttac
ttcaaatgcgcccagcatcccagtttaggagagaacgaccaagctgtgcccctttatctt
gtaaagccaaacttgaggaacatcccttgtctggcttgcacggatatcagggaaaccgtc
ttagtgtttccgtgcgaagctggtcatgtgacttgtctcgattgctttcgcgaatactgt
acagttcgtttagacgagcgacaatttcaattcgatactaccgatggatattacacgttg
tcttgccctgctggctgctccaattctttcatccgtcaagttcatcatttccatcttctt
aacacggaacagtatgaaagatatcagagatttggcgcggaggaacatgttttgcgtgcc
ggtggccttttgtgtccaaggccaaactgtgggatgggtattataccaccttcggcggag
gatgcagagtgccgaaagattcaatgcatcggtggatgtggctatgttttttgcagaatt
tgtctgcagggatatcacgtgggagaatgtgaatcgcaaagtctcgaaacgtctacgagt
ggtttttcttcaagaaattattccatagatcctgccagagctaacgaggccaagtgggaa
gaagctagcaaaaaggcgatacagctatctacaaagccttgccccaagtgtagaactcct
accgagagagacggaggttgcatgcatatggtgtgcacaagagcgggatgcagctaccat
tggtgctgggtatgtcaaacggaatggagcagagaatgcatgggcaaccattggttcgga
taa
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integrated database retrieval system
