Vollenhovia emeryi: 105565732
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Entry
105565732 CDS
T06016
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
vem
Vollenhovia emeryi
Pathway
vem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105565732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vem03021
]
105565732
Enzymes [BR:
vem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105565732
Transcription machinery [BR:
vem03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
105565732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
AcetDehyd-dimer
FAM198
Motif
Other DBs
NCBI-GeneID:
105565732
NCBI-ProteinID:
XP_011874550
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MVKEQFRETNIASEVSHISFGVDSQNVMFMQASVEVFSKSLYNEDTRRTPALYGALDRRM
GVSSTGLECETCGKKLNDCVGHFGYQNLQLPVFHVGYFKSIIQILQTICKKCAHVLLTRE
ERRCFLVKIEAPKLGYLARKGLRKQVWEKAKKKTECPNCKANNGPVKKAGFLKIVHEKYK
NLKKTDPIFQDTLADLTPKMERDKEFKNIIDQNYRSTFDEYLYPNFVAELFARIPTVDIC
LLLMHPDCAVPENLLLMRIPVPPICIRPSVLSDLKAGTNEDYLTMKLSEIALINDVIRKQ
TGVNMNMYMEHWDFLQLHCGLYINSEMSGIPLHMQPKKFGRGIVQRLKGKQGRFRGNLSG
KRVDFTSRTVISPDPNLRIDQVGVPLHVAKTLTYPERVTPSNIDLMRKLVRNGPDKHPGA
NYVQFKNSQFRQYLKYGDRNKAAQELQYGDIVERHLKDDDLVLFNRQPSLHKLSIMTHRT
KVQEHRTFTFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLLANKSNLVTPRNGEIL
IAATQDFITGAYLLTQKDMFLTIEQVRFALCILAGQDSSMIVTLPQPAILKPTKLWTGKQ
IFSLIMRPNEECPVKANLKTKGKAYTNSEELCINDSYIVIRNSELLAGIMDKSILGSGSK
QNIFYILLRDWGEDVAITAMWRLTRIANHFNFGKGISLGISDLIPSQGLLQAKEEMLNAH
YSECKKYIQLMEQGRLVCQPGCSEEETLETKILTELSVIRENVGRACLKELHPTNTPLTM
ALSGSKGSFINISQMIACVGQQAINGRRVPDGFENRALPHVMARLKTPDAKGFVENSFYS
GLQSKEFYFHAMGGREGLTDTAVKTAETGYMQRRLIKSLEDLCIHYDMTVRNSMRDMIQM
SYGGDGLDPTYIEGKDGPVDYKRVYDHVRAKMPHKSEAPLDAASVMNATNEMLSSEEYEC
LSDEFKQELLAFLKSVARKIAYYRQNFPSNLPVVSQLERFTVSQLVEFIHTCKEKYMKAK
IEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVAAMNITQGVPRIKEIINASPKISTPITT
AILVNDTDSEFAERVKARIEKTTLADVAKYIEELYTRDDHFLVINLDMDRIKMLKLEVDV
NSICYTLCTSKLKLTSKNIEVIDNSIIIIRPNRQKDGSNFPFRQLTEAIPNVVVKGLSTI
NRVVVHNENLDGKTKFTLFVEGDNFREVMATPGIIGEKTKSNNTIEVFKTLGIEAARATI
MSEIKSVMENHGISIDCRHLMLLSDLMTSRGEVHGITRTGLAKMKESVLNLASFEKTADH
LFDAAYYGQKDIICGVSESIIMGIPVPLGTGIFKLLQKADKNEPIKRELLFDDPQFHNPL
SEKRSRRIRPRPIFQV
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacagttcagggagactaacatcgccagcgaagtctcccacatatccttc
ggagtggacagccagaatgttatgttcatgcaggccagcgtggaggtgttttccaaaagt
ttgtacaatgaggatacaaggcgtactccggcattgtacggagcgctcgataggcgcatg
ggagtcagctcgacgggactcgagtgcgaaacgtgcggcaaaaagctgaatgactgcgta
ggacactttggatatcagaacctgcaactgccggtctttcacgtcggctactttaaatcc
atcatccagattttacagacgatatgcaagaaatgcgcgcacgttttgctgacgcgagaa
gaaaggagatgttttttggtcaaaatagaagctccgaaactggggtacttggcgcgcaaa
gggttgcgtaaacaagtctgggagaaggctaagaagaagacggaatgcccgaattgcaaa
gcgaataatggccccgtgaaaaaggccggtttccttaaaattgtacacgagaagtacaag
aacttgaaaaagactgatcccatttttcaagacacgttggctgacctgactccaaagatg
gaacgcgacaaagagtttaagaatataatagaccaaaattacagaagcacattcgacgag
tatctgtatccgaactttgtggcagaacttttcgctagaattccgacggtcgacatttgt
ctgttgttaatgcatcctgactgcgcagtaccagaaaatttactactaatgaggattcct
gtgccgccaatttgtattagacccagcgttttatctgatctaaaggctggtaccaatgag
gattatctgacgatgaaattgtcagaaatagctcttatcaatgacgttattcgtaagcaa
acgggtgttaatatgaatatgtacatggaacattgggattttcttcagctgcattgtggc
ctttatattaacagcgaaatgtccggaatacctttacacatgcagcctaaaaagtttggc
agaggtatagtgcaaagattgaaagggaagcaaggtcgtttccgaggtaacttatctggt
aaacgtgtcgactttacttctcgcacagtaatttcgcccgatccaaacctcagaatagat
caagttggtgtacctttgcatgttgcaaagaccttaacgtatcctgaaagggtcactcca
tcaaacatagatctaatgcggaaattagtcagaaatggcccggacaaacatcccggtgcg
aactatgtacaatttaaaaactcgcagtttaggcaataccttaaatatggcgatcggaat
aaagcagctcaagaattacagtatggtgacattgtcgagaggcatctcaaagatgatgac
ttagtgctgttcaatcggcagccgtctctacacaaattaagcatcatgacacacagaacc
aaggtacaggagcatcgaacgttcacatttaacgagtgcgtctgtacaccttataatgcg
gattttgacggagacgaaatgaatcttcatctaccacagactgaggaagctagagcagag
gcgttggtcttgttggcgaataaatccaatctggttacacctcgcaatggtgagatattg
atagcagcgacgcaagattttatcaccggtgcttatctcttgacccaaaaggacatgttt
ctcacgatagagcaagttagattcgctctttgcatcttagccggccaagattcttccatg
atcgtaactcttcctcagcctgcaatattaaaaccgacgaagttgtggaccggtaaacaa
atattcagtctgattatgcggccgaatgaggaatgtcctgtcaaagcaaatctaaagacg
aagggcaaggcgtataccaacagcgaagaattgtgcattaatgactcttacatcgtcatt
cgcaactccgagcttctagcgggaataatggataaatctatattgggctcagggtcgaag
caaaatatattttatattttgctgcgtgattggggtgaggatgttgcaatcacagctatg
tggcgtttaaccagaatagcgaatcatttcaatttcgggaaaggaatttctctcggtatc
agtgatcttatacccagtcaaggccttcttcaagccaaggaagaaatgttaaacgcccat
tactccgaatgtaagaagtatattcagctaatggaacagggtcgtctcgtttgtcaaccc
ggatgttcagaagaggaaacactggaaacgaaaatattgaccgagctctcggtgattcgt
gagaacgttggtagagcatgtttaaaggaattacatcctactaatactcctttgactatg
gcgctgagtggaagcaagggtagttttattaacatctctcagatgatcgcctgcgtaggc
cagcaagctatcaacggacgcagagtgccggacggattcgagaatcgtgcattacctcac
gtaatggcgcgactgaagacgccggatgccaaaggctttgtggagaattcattttattcg
ggattacagtccaaggaattctactttcacgcgatgggcggtcgggagggcctcacggat
accgctgtgaaaactgcggagaccggatacatgcagaggcgattgatcaagagtttagag
gatctgtgtattcattatgatatgacggtgcgcaactcgatgcgcgatatgatacagatg
tcatacggcggagatggattggatcctacgtatatagaaggtaaagacggtcccgtcgat
tacaaacgagtgtacgaccacgtgcgagcaaaaatgcctcataaaagcgaagcgccttta
gacgccgccagtgttatgaatgccacgaatgagatgctatcttccgaggagtacgagtgc
ctgagtgatgaatttaagcaagaactactcgcttttctgaagtcggtggcgcgaaagata
gcatattatcgacaaaactttccatcgaatttgccggtagtctctcaactcgaacgtttc
accgtctcgcaattggtagagttcattcatacgtgtaaggagaagtacatgaaagccaag
atagaaccgggcaccgccgtaggcgcactcgccgcgcaaagtatcggcgagccgggaact
cagatgacgctcaaaacgttccacttcgccggtgtagcggccatgaacatcacgcagggt
gtgccacgtattaaggaaattattaacgcgagtccgaagatcagtactcccatcacaaca
gcgatattggtcaatgatacggattctgagtttgctgaacgagtgaaggcaagaatcgaa
aagacgactctggcagacgtggctaagtatatcgaggaattatacacgcgcgatgatcat
tttcttgtaataaatctagatatggataggattaaaatgttgaagttagaagttgatgtt
aattctatatgctacacactttgtacatcaaaattgaagctgacgtcaaagaatatagaa
gtgatagacaattcaattattattattcgaccaaatcgacaaaaagacggttccaatttt
ccgtttcgtcaattgacagaggccattccgaatgttgtagtaaagggcttatcgacaatc
aatagagtggttgttcacaacgagaatctcgatggcaaaacgaaatttacactatttgtc
gaaggagataattttagagaagttatggcaacacccggtatcatcggcgagaagacgaaa
tcgaataatacgatagaagttttcaaaacgcttgggatagaagcagcgagagcaactatc
atgtccgaaattaaatcggtaatggaaaatcacggaatcagtattgattgtcgacattta
atgctcttgtcagatttaatgactagtagaggagaagtgcatggtattacgaggacggga
ttggcaaaaatgaaagaatcggtcttaaacttggcatcgtttgagaaaacggcagatcat
ttattcgatgcggcttattatggacaaaaggacattatatgcggcgtatcggaatcaatt
ataatgggtattccagtcccactaggcacgggaatcttcaagctgcttcaaaaggcagat
aaaaacgaaccaatcaagagggaacttctatttgatgatccacagtttcacaacccactt
tctgaaaaaagatctcggcgaatacgaccgcgtccaatatttcaagtttag
DBGET
integrated database retrieval system
