Vollenhovia emeryi: 105565737
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Entry
105565737 CDS
T06016
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
vem
Vollenhovia emeryi
Pathway
vem03030
DNA replication
vem03410
Base excision repair
vem03420
Nucleotide excision repair
vem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105565737
03410 Base excision repair
105565737
03420 Nucleotide excision repair
105565737
03430 Mismatch repair
105565737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vem03032
]
105565737
03400 DNA repair and recombination proteins [BR:
vem03400
]
105565737
DNA replication proteins [BR:
vem03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105565737
DNA repair and recombination proteins [BR:
vem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105565737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
DNA_pol3_delta
AAA_30
Rad17
AAA_22
RuvB_N
AAA_5
AAA_14
PTCB-BRCT
AAA_18
AAA_16
AAA_6
AAA_17
AAA_33
NTPase_1
AAA_7
nSTAND3
AAA_19
RNA_helicase
BRCT_2
Viral_helicase1
TsaE
Motif
Other DBs
NCBI-GeneID:
105565737
NCBI-ProteinID:
XP_011874558
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MSRDIRSYFAPIASTQRKKCEPVAPKPQKRRVISSDEDEERPRSSTKRTKVVRKTKKASI
LSDSDDDIVVYDKKDNRQPEASKKNESEKPLAAISADEFFGKKPITRVDDTKVDQKLQKV
ESKFHDDDDFDAVLEQLDTFEDTRTPDKMKDKSGAKNGGTPKKSGVAAKTEASSNKRKYD
ACSKEAINKTSKLNPEEMKILPSKNSINSKDIKSSPKQKLQSERKGGFNIDLSISDKRDD
KISKQLNSDNLRHNLTSTSASEEDKGTGKSPSRKKAKTDLFDERIEKKKQRAILYEKYLQ
RGGAKNPGSKEIPTGAENCLAGVTFLSTGVFDSLERNEVEELIQKYGGRTVNSVSSKVNY
VIVGDVAGPAKLAKASSLGIKQISEDGLLEMIRTRPEGKAVNVKPTKTKPSVKNVLNKSE
SDKSSSSNEVKALSSAKKIKTPPSSPVETLLPNISTEKTTTSIGSEPLVEKYRPKTMKQI
IGQQGDKSCAHNLYVWLRDWHKSRQDPKFKDAGRQTHGQNFKAALLSGPPGVGKTTTVQV
VCKELGYDLVEFNASDTRNKALLKESVSGLLSNTTMKDYVTGSKKKITTKHVLLMDEVDG
MAGNEDRGGLQELVSLIKHTEVPIICICNDRFNTKVKTISTHSYDLKYPKLRVEQIRSFM
KSLCFKENIKISTEDLDRLIESTNYDIRQVVNHLEFLGSQIPHVETSDKKHSNKDFKLGP
FDVTKMAFNAEEQKRMSLNDKIGLYFNDYNIAPLFIQENYPGVRLSQVSPYQRLERIARA
ADSISRGDLVEKVMRSGMMWSLLPMHACFSFVLPASEMSGCSDPLIRFPSWFGRNSKATR
FNRLMQELSTHTRLATGANKDALNMDYLAHIRNAIVKPLIDDGADGIEAAINVMGKYYMT
REDLDSAIEISQWPGLCDITTNLDSKVKAAFTRAYQKNPPMLPYAINSTATAKKKTVQDN
DFVEEDDDEEETNDIESDKMIKAKKPTAASTSKASASTKKGEPTKKRGRGRGKAK
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggacatcagatcctacttcgcgccgatcgcgtctacgcagaggaagaaatgc
gagcccgtcgccccgaagcctcagaagcggcgtgtcatttcgtcggacgaggatgaagag
aggccgaggtcgtccacgaagcgtaccaaggtcgtgcgaaagacgaaaaaagcttccatc
ctgtccgattctgatgacgacatcgtggtatatgacaagaaagacaacagacaacctgaa
gcgagtaagaagaatgagagcgagaagccactcgcagcaatatcggccgatgaatttttt
ggcaagaagccaataacgagagtagacgacacaaaagtcgaccaaaaattgcagaaagtg
gagtccaagtttcacgacgacgacgatttcgatgcggtgcttgaacagttggacacgttt
gaggataccagaacgccggataaaatgaaagataaaagcggtgctaaaaatggaggtact
cctaagaaatctggagttgcggctaagacagaggcgagctctaataagagaaaatacgac
gcttgttcgaaagaggccattaacaaaacgagtaaactgaaccccgaggagatgaagatt
ttgcccagtaaaaatagtataaattcaaaggatattaaaagttctccgaaacagaaatta
caatccgagaggaaaggcggttttaacatagacttaagtataagcgataagcgcgacgat
aagatttctaagcaattgaattccgataacttgaggcataatttgacgtctacctctgcg
tcggaggaggacaaaggtacagggaaatcaccaagtaggaagaaagccaaaacggattta
ttcgatgaaaggatagaaaagaagaagcagcgtgctatattgtacgaaaaataccttcag
agaggcggcgctaaaaatcctggctcaaaagagatacctacgggtgccgagaattgctta
gctggagtaactttcttgagtactggtgttttcgattctttagaaagaaatgaagttgag
gaattaatacagaaatatggtggccgaaccgtgaacagtgtgtcaagcaaagtaaattat
gttatagtaggagatgtagctggcccagctaaattggcaaaagctagcagtttaggcatc
aagcaaatatctgaggatggccttctagaaatgattcgcacgagaccggaaggtaaagct
gtaaatgtcaagccgacaaagacgaaaccaagcgtgaaaaatgtattgaataaatctgag
agcgataaatcgtcatcgtcgaacgaagtaaaagcattaagttcagctaaaaagataaaa
acgccaccatcttcaccggtggaaacattattgccaaacattagtacagaaaagacaact
acgagcattgggtcagaaccgttagttgagaagtatagacctaaaactatgaagcagatc
ataggtcaacagggggacaagagctgtgcacacaacttatacgtatggctacgtgattgg
cataaaagtcgtcaggatcccaaattcaaagacgccggcagacaaactcacggacaaaat
ttcaaagctgccttgctgtccggaccaccaggcgttggtaaaacaacaactgtgcaagtt
gtctgtaaagaattgggatacgatcttgtggagttcaatgcttctgacacgagaaacaaa
gcacttttgaaagaatcggtctcggggttgttgtccaacaccacaatgaaagattatgtc
acaggttccaagaaaaaaattacgaccaagcacgtactgttgatggacgaagtcgacggt
atggctggcaatgaagatcgcggtggcttacaggaattagttagtttgataaaacacaca
gaagtgccgattatctgtatatgtaatgaccgatttaatacgaaggtgaaaacaatttcc
acgcacagctacgatctgaaatatccgaagctcagagtggaacagatcaggagttttatg
aagtccctgtgctttaaagagaacatcaagatctcgacggaggacctcgatcgtctaatt
gaatcgacgaattacgatattcgacaagtggtaaatcatctggaatttcttggcagccaa
atccctcacgtggagacgtctgacaagaaacattcgaacaaggacttcaagctcggccca
ttcgacgtcacaaaaatggcgttcaatgcggaagagcaaaaacgtatgagtttgaacgat
aaaatcggcttatatttcaacgattacaatatagcgccccttttcatacaagaaaattat
ccgggagtcagattgtctcaagtgtcaccttaccagaggctagaaagaatcgcccgtgcg
gctgatagtatatctcgaggagacctcgtcgagaaagtgatgagaagcggtatgatgtgg
agcctacttccgatgcatgcttgtttctcgttcgttttaccagctagcgaaatgtcggga
tgctctgatccgttgatacgatttccgagctggttcgggcgaaattccaaggcaacgaga
tttaaccgattaatgcaagagctgtcgacgcatacacgattagccacgggtgcaaacaag
gacgccttgaacatggattatctggctcatattcgaaacgccatcgtaaaacctctgata
gacgacggcgcggatggtatagaagcagcaatcaatgttatgggaaagtattatatgacc
agggaagacttggattcagcaatagaaatctctcagtggccaggactttgcgacattaca
actaatcttgatagtaaagtaaaggcagcatttacacgagcgtatcaaaagaatcctcct
atgttgccatacgcaatcaacagtactgctacagcgaagaaaaaaactgtacaagacaat
gatttcgtagaagaagatgatgatgaagaagaaactaatgatattgaatctgataagatg
atcaaggcaaaaaaacctaccgctgctagtactagtaaagcttctgcatcgacgaagaaa
ggcgagccaactaagaaacgcggaagaggacgcggcaaagcaaaatag
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