Vollenhovia emeryi: 105565941
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Entry
105565941 CDS
T06016
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
vem
Vollenhovia emeryi
Pathway
vem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105565941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vem03019
]
105565941
Messenger RNA biogenesis [BR:
vem03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105565941
mRNA degradation factors
5'-3' decay
Decapping complex
105565941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Syntaxin
Motif
Other DBs
NCBI-GeneID:
105565941
NCBI-ProteinID:
XP_011874946
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MPERDAAGDMSKTGEGNLRHLYQQTVEFSGREDQHSVELCSTDVVIVPSPGDHDHGSSKV
KLKNIVDFTWDHHLYTGQLLAVHVSGKYLAYGLKVGTGGGVVRVVFKELEHRALLRGMRG
TIQDLAFAHVSNAILACIDYTGSLFIHTIEPTPSELLCSLVLQVDAEDVSPTSHRVIWCP
YIPEDVSGDASDVDEVSKLLVVTRGSKVELWSVATIASRFRSVEVTDPSIKESGGMMEID
QHSGTIVEATLSPDGTALATASTDGEVKFFQVFLHSNSQNGQSQPRCLHQWRPHGGRPIS
CLFFLDDHKNYQPEVQFWRFAVTGCDNNLELKVWSCELWTCLQTIKFVVNPSTSKLPVLK
AGLDLSAGYLFLSDIYNKVLYILSLSKDKGEALACISTVSEFLLPYPILSFGIVDADQRK
IRSTGESLEDLCEEIEENDEQLVISMYLVQPKSLQECHIAFKPASQASGNYLIDTLTHDS
LDYPEDPDMPDLATVTHNGMSEENCEGERSLSTTIEATMNHNSGSLNLMTPDAFSSPAKK
EGNELESNPESPDLRKVLSSSPIAQAVQALNASDQPLVKNEIEEQAPASCGSSPSREVRE
IMSHTKADEETDIDKPETKTNADEDWSNIPMVMLKDVSVHTMQDPVEFPEDDENDGQKTK
DEPKTSSPPDEPGTPWRTNNDINLELNDKLKSILDIIQDQCQELKELRTEVTRLRQESPV
STQLESALARMSQQQNANLEQSFYDQMSRQHEFLNTFETTIKDKIESTLPRTVEETIKPF
KHQIRLDANQMDEHFQKNITELIKSSHVKDTLSITAANAVKPAVEIAFKETFTSILLPSM
EKICKIMFKQIQDAFVKGTHEYLQHVDTVVDKQYLSHNEQLSEMLSTLVREEIQAELSRV
LTTMQDGTVRAIRDSIRENLNQHLIEISSARSRATTPAIPVTAVADAQARVTSLIQKGQL
NAAFQQALSASDLGLVVLACEKTEPARVFSCTGAQGQVSRCILQQPVILSLVQQLSADLG
HRTELKHKWLEEAILNLDPNDPVTREHMGTVLMTLQNQLAAFVASNPNHRSTRRMKMLAM
ATRSLLTQHH
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagagggacgcggccggcgacatgagcaagactggggagggcaatctgaggcat
ctctatcagcagacggtggagttcagcggacgggaggatcaacattcagttgagctatgt
agcacagatgtggtcatcgttccttcccccggggatcacgaccatggcagttctaaagta
aaattgaagaacatcgttgatttcacatgggatcaccatctttacaccggccagttgtta
gccgttcatgtatctggaaaatatttagcctacggtttaaaagttggtaccggtggtggg
gtagttcgtgttgtgttcaaggaattagaacatagagctctgctgcgaggaatgcgtggt
actattcaagatcttgcgttcgcccatgtttccaatgcaattcttgcgtgtatcgattat
acaggatcgctttttatacacacgattgaacccacgccgtctgaattattatgtagttta
gtattacaagtggacgcggaagacgtttctccgaccagtcaccgagtgatctggtgtccg
tacatcccagaggatgtctctggcgatgcctccgacgtggacgaagtatcaaaattacta
gtcgtaactcgtggctccaaagttgaattgtggtcggttgcgacgatagcgtcgagattt
agatcagtagaagtaacagatccgagtattaaggaaagtggcggcatgatggaaattgat
cagcactcgggaactattgttgaagctacacttagtccggacggtactgcgttagcaact
gctagtacagacggagaagtgaaattctttcaagtcttccttcatagtaattctcaaaac
ggccaatcgcaaccacgttgtctacatcaatggagaccccatggaggacgacccatttcc
tgcctatttttcctcgatgatcacaaaaattatcagcctgaagttcaattttggagattt
gctgtgacggggtgtgacaataatttagaactgaaagtatggtcgtgtgaattgtggact
tgtctacaaacaatcaaatttgttgtaaatccttctacgagcaaattgcccgtactgaaa
gcgggattagaccttagtgccggatatctatttctttcagacatatataataaagtttta
tatatactgagtctttcgaaagacaaaggtgaggcgctagcatgcataagcacggtatca
gagtttctcctgccatatccaattctaagcttcggaattgtcgacgctgatcaacgtaag
atacggtctactggcgaatcgctggaagatctatgcgaagagattgaagagaacgacgaa
caacttgtcatttccatgtatttagttcaaccaaagtcgttgcaggagtgtcatattgcc
ttcaagcctgcctcgcaagcaagtggcaactaccttatagatacacttactcacgattca
ctggattatcccgaggatccagatatgccagatctggcaacggttactcacaacggtatg
tccgaagaaaattgcgagggagagcggtctttgtctactacaatcgaggcgacaatgaat
cacaacagtggtagcttaaacctaatgacgcctgatgcgttcagttcgcctgcgaaaaaa
gagggcaacgaattggagtctaatcccgaaagtccagatttgaggaaagtcttgtccagc
agtcctattgcgcaagcggtacaagctttgaacgcatctgaccagccgctcgtgaaaaac
gagatagaggagcaagctcctgcgagttgcggcagcagtccatctagagaagtaagagaa
atcatgtctcatactaaagcggacgaggagactgatatcgacaagccggaaacgaaaacg
aacgccgatgaggattggtctaatatcccaatggtcatgcttaaagacgttagtgtgcac
acgatgcaagatccggtagaatttcccgaagacgatgagaatgacgggcagaaaacgaaa
gatgagccgaagacgtcgtcccctcccgatgaacctggaacgccgtggcgaacgaacaac
gacatcaatctcgaactgaacgacaagttgaaatctattttagatataattcaggatcag
tgtcaagagctgaaagaattgcgcacagaagttactagattgcggcaagaatcgccagta
agcacgcaattagaatccgcattggcgagaatgtctcaacagcagaatgcgaacctggag
caatctttctacgaccaaatgagtcgccaacatgaatttctaaatacattcgagacaacg
atcaaagacaagatcgaaagtaccctgccacgtacagttgaagagacgataaaaccattc
aaacatcaaataagattagacgcgaatcaaatggacgaacacttccagaagaacatcact
gaattaataaagagttcgcatgtgaaggataccttatctataacggctgccaatgcagtt
aaaccagctgtggaaattgcttttaaggaaacgttcacgtctatccttttacctagtatg
gagaaaatctgcaaaattatgtttaagcaaatccaggacgcctttgttaaaggtactcat
gaatatttacaacatgtcgatacagttgtcgataaacagtatctaagtcacaatgaacag
ttgagcgaaatgttatcaacgttggtacgcgaagaaatacaggctgaattgagtagagtt
ttgacgacgatgcaagatggtactgttcgagcaattcgggattctatacgagaaaatctg
aatcaacaccttatagaaatttccagtgcacgatcgagagctacaacgcctgctatacct
gtaaccgctgtagctgatgctcaagcgcgtgtcacgtctctcattcaaaaaggtcaatta
aacgccgcttttcaacaggctctgagtgcgagtgatttaggattggtggtattagcgtgt
gagaaaacggaacctgcgagagtattttcgtgtacaggagctcaaggacaagtttcaaga
tgtattctgcagcagcctgttattctttctcttgttcaacagttatctgctgatttaggc
catcgtacagagttgaagcacaagtggttggaagaagcaatactaaatttggatccaaac
gatcctgtaacacgggaacatatgggcacggtgctaatgactctacaaaatcaattagct
gcgtttgtagcaagtaatccgaatcatcgatcgacgcgccgtatgaaaatgctcgctatg
gctacacgttcgctattaactcaacatcattga
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