Vollenhovia emeryi: 105565954
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Entry
105565954 CDS
T06016
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
vem
Vollenhovia emeryi
Pathway
vem03030
DNA replication
vem03410
Base excision repair
vem03420
Nucleotide excision repair
vem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105565954
03410 Base excision repair
105565954
03420 Nucleotide excision repair
105565954
03430 Mismatch repair
105565954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vem03032
]
105565954
03036 Chromosome and associated proteins [BR:
vem03036
]
105565954
03400 DNA repair and recombination proteins [BR:
vem03400
]
105565954
DNA replication proteins [BR:
vem03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105565954
DNA Replication Termination Factors
ELG1-RFC complex
105565954
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105565954
DNA repair and recombination proteins [BR:
vem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105565954
Check point factors
HRAD17(Rad24)-RFC complex
105565954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_16
AAA_22
AAA_14
AAA_5
RuvB_N
AAA_11
DUF815
ResIII
AAA_30
AAA_24
DEAD
AAA_19
ATPase_2
AAA_7
AAA_assoc_2
PhoH
Mg_chelatase
TniB
AAA_13
RCF1-5-like_lid
FtsK_SpoIIIE
bpMoxR
TIP49
nSTAND3
MCM
AAA_3
AAA_25
Motif
Other DBs
NCBI-GeneID:
105565954
NCBI-ProteinID:
XP_011874966
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MTSSDERLVNLPWVEKYRPKSLDELISHETIIKTINKYIDENQLPHLLLYGPPGTGKTST
ILACARKLYTPAQFNSMVLELNASDDRGIGIVRGQILSFASTGTMYRSAFKLIILDEADA
MTTDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFLPLASQQIMPRLNHV
IEAENLKVTEDGKEALMTLSGGDMRKVISVLQSTWFAYGMVSAENVYNCVGHPLPSDIKS
ILNWLLNEPYDTCYKKIQELKLNKGLALQDILTEIHSCVVTIAFPDSMFIDLLCKMADIE
KRLAGGCRDAIQVNSLISAFYKVRDIET
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccagcgacgagcggctcgtgaatttaccatgggtcgagaagtaccgtcccaag
agcctggacgagcttatttcccacgagacgataataaagacgataaacaagtacattgat
gagaatcagctgccgcatcttctgctgtacgggccacccgggacgggcaagaccagcact
atactggcgtgcgcacgtaaactctacaccccggctcaattcaactcaatggtgctagaa
ttgaacgcttccgatgacagaggcatcggtatcgtgcgcggccaaatcctgagtttcgcc
agcacgggcactatgtacagatctgcgtttaaattgattatcctggacgaggccgacgct
atgacgaccgacgctcagaatgcactgaggagaattatcgagaagtacacggataacgtg
cgtttctgcatcatatgcaactacctgagcaagattatcccggctttgcagtctcgttgc
accaggtttagattcctgcctctcgcctcgcagcagataatgccgagattgaatcatgtc
attgaagcggaaaacttaaaagttacggaggacgggaaggaagcgttaatgacgttaagc
ggtggagatatgaggaaagtaataagcgtactacaaagtacatggttcgcttacggcatg
gtgagcgcagagaacgtgtacaattgtgtgggacatccgttaccaagtgacataaaaagt
atcttaaactggttgctgaacgagccttatgatacgtgctacaagaagattcaagagctg
aagttgaacaaaggacttgcgctgcaagatatattgacggaaattcactcgtgcgtagtc
acaattgcatttcccgattcgatgttcatcgatttactgtgcaaaatggcagatatagaa
aaaagactggctggcgggtgtcgcgacgccattcaagtaaattcccttatatcggcgttc
tacaaggttcgcgatatcgaaacgtga
DBGET
integrated database retrieval system
