Vollenhovia emeryi: 105566021
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Entry
105566021 CDS
T06016
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
vem
Vollenhovia emeryi
Pathway
vem04140
Autophagy - animal
vem04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105566021
04148 Efferocytosis
105566021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vem04131
]
105566021
Membrane trafficking [BR:
vem04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105566021
Hops complex
105566021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-RING_16
zf_RING_Vps8
zf-C3H2C3
zf-RING_2
COMP
zf-C3HC4
zf-RING_Vps41
zf-RING_UBOX
zf-rbx1
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
105566021
NCBI-ProteinID:
XP_011875087
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVLAPPIRPDISTAGFIQMKLQDDGPIFTKQKVNFLPSDKILHL
AVSSNTIVIAMANNILLRIDMKQPDKTEEIDISKYALSMKMSGLFLDPLGHHLLITLVPK
HGDNPPPELFYLHRKTTKLKQAGKFKGHEITAVGWNFSNASETSSGPILLGTAKGLIFET
EIGLETDKIFNTSLEQYWRQLPNYLPLYGSKEAGGLVFDIGKNSKPPITGIEFHKIPNSD
KYVIIVTTLMRIYQYIGAIGNPEEKPLLQQVFYRYLNAQETFNEVINSLPYSKMQFYYPS
LGVLPKSFGWLTEAGILHAQVDAKPDANNVLVNQRMLTCPETSLMGSNVPQTTSVPLSFV
LTEFHALLLYPDHVKGISLLNQELIFEDIYNDAVGKLIGITKDPATRSIWAYSERAVFKY
KVTKEDRNVWQVYVDKGEFELAKQYCKDNPAHNDQVLVKQAEMLFKNKEYEKSALIYADT
HSSFEEVSLKFLQEWQIEALKTFLRKKLDGLKTQDKTQITMIVIWVTELFMNQMGALRSS
NTSYLHDSQYTELQKQFDSFLTIPKVEECIRRNRSTIYDLMASHGDKDNLIRLTIMHCNY
EEVIRQHLYKNNYLEALGVLKSQNNKDLFYQFAGILLQELPRPTVAVLISQGSSLKPAKL
LPALVSCNSDEKHAKEIIKYLEFCVYKQGSQEQAIHNFLLSLYARYKQDEVMRYISSQGQ
DISMVHYDVHYALRLCQEVGLTEACVQLSALLGLWTTAVDLALTISVDLAKQIAAMPSDH
DDELRKKLWLKIAEHVVREKDDIQQAMEFLQHCDLVRIEDILPFFSDFVTIDHFKEAICN
SLQEYNQHIQDLKEEMHEATKAAELIRNDIQAFRTRCTFVHARDTCNTCEVQLLLRPFYV
FPCGHKFHSDCLVAALTPMLSMDQRTKLADLQRQLTAISNRPEDTTSTISVSLSTRDQIK
ADIDDLVASECLYCGELMIESIDKPFIEEEDYERVMKEWM
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgatgttcgaccagtacgagcaagcttctcagcgctccaagcaagtactggcg
ccaccaattcgtcccgatattagcacagctggtttcatacaaatgaagctgcaggatgat
gggccgatattcaccaagcagaaggtcaactttctgccgtcggacaaaattcttcacttg
gcggtcagcagtaacacaattgtgatcgccatggctaacaacattttgctacgcatcgac
atgaagcaacccgacaaaactgaagaaatcgacatatccaagtatgcgttgagtatgaag
atgtccggcttgtttctggatccgttgggccatcacctgctgataactttggtgccgaag
cacggagataatccgccgccggagttgttctacttgcacaggaagacgacgaagctgaag
caggctggcaagttcaaaggccacgagatcaccgcggtaggttggaacttctccaatgcc
tcggaaacgagctccggtcccattctgctgggcaccgccaagggcctgattttcgaaacg
gagatcggcttggagactgacaagatttttaacacgagtttggagcaatattggcgtcag
cttccgaattacttgcctctttatggttcgaaagaggcaggaggattggtgtttgacatt
ggaaagaacagcaagcctccgatcaccggaatagaattccacaaaattcccaactcggat
aaatacgtgattatcgtgaccactctcatgcgaatttatcagtatatcggtgccattggc
aatcccgaggagaagcctctcttgcaacaagtattctatagatatctaaacgcgcaagag
acctttaacgaagtaataaattccttgccatattcgaagatgcaattttactatccatcc
ctaggcgtcctgccaaagtcgtttggatggctgacggaagctggcatcctgcatgctcag
gtggacgcgaaaccggacgcgaacaacgttctggtgaatcaacgaatgttgacgtgtccg
gaaacgagtcttatgggcagtaacgtcccgcaaaccacctcggtgccattgtccttcgtg
ctgacggagttccacgcgttgctgttgtacccggatcacgtgaagggcatatcgctctta
aatcaggaattgatattcgaagatatttacaatgacgcagtcggcaaattaattggcatc
accaaggatccggcaacgaggtcgatttgggcttacagcgagcgagctgtcttcaagtac
aaagtaacgaaggaagacaggaatgtttggcaggtatacgtcgataagggtgagtttgag
ttggctaagcagtattgcaaagacaatccggcgcataacgatcaagtgctcgtgaaacag
gcagaaatgctcttcaagaataaagaatatgagaaaagcgcgctaatatatgctgatact
cactcgtctttcgaggaggtttcgttgaagtttctgcaggagtggcagatcgaagctttg
aaaacgtttctgcgcaagaaactcgacggtttgaagacgcaagacaagacgcagataaca
atgattgttatttgggtaacggaactgtttatgaatcaaatgggagctttgcgtagcagt
aacacgtcctaccttcacgattcgcagtatacagaattgcagaagcagtttgacagtttt
ctcaccattcccaaagtcgaggaatgtattaggagaaaccgcagcacgatatacgattta
atggctagtcacggtgacaaagataatctgatacgtctgacaataatgcactgcaactac
gaggaggtgattcgtcagcatctgtacaagaataactacttggaggcactcggagtactc
aagagtcagaacaataaggacctcttctatcagttcgctggaatcctgttgcaggagttg
ccaaggcctacggtggccgtcttgatttcgcaagggtcatcgctgaagccggcgaagctt
ctgccagctttggtctcgtgcaacagtgacgagaaacatgcgaaagaaattattaaatat
ttggagttttgtgtgtacaaacaaggctcgcaggaacaagcaattcacaatttccttctg
tccttgtatgcgcgttacaagcaggacgaagtgatgcgatacataagctctcaaggtcaa
gatatcagtatggtgcactacgacgtacattatgcgttgcgattgtgtcaggaagtgggc
ttgacggaagcctgtgtgcaattgtcggctttactcggtctctggaccaccgccgtggat
ctcgcgctcacgatcagcgttgatctcgctaagcagatcgccgctatgccgtcggatcat
gacgacgagttgaggaagaaactgtggttgaagatagcggagcacgtggtgcgagaaaaa
gacgacatacagcaagcaatggagtttttacaacactgcgatttagttaggatagaagac
attctgccctttttctccgatttcgtcacgatcgatcatttcaaggaagctatttgcaat
tccctgcaggagtataaccagcatatacaagatcttaaggaagaaatgcatgaagccacg
aaagcagcagagttaatacgaaacgacattcaagccttcagaaccagatgcacattcgtg
catgcacgggacacgtgtaatacgtgcgaggtgcaactgttgctgagacccttctatgta
tttccctgcggtcataaatttcatagcgattgtttagtagcggcgttaacgccgatgctg
tctatggaccagaggacgaaactggcagatcttcagcgacagctcacggctatctcgaat
aggcccgaagacaccacctcgacgatctccgtgtcgttgtccacgagggaccagatcaag
gctgatattgacgacctggtcgcctcggaatgcctttactgcggagagcttatgatagaa
tcgatagacaagccattcattgaggaagaggattacgaacgcgtaatgaaggaatggatg
taa
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