Vollenhovia emeryi: 105566760
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Entry
105566760 CDS
T06016
Name
(RefSeq) protein trachealess isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vem03000
]
105566760
Transcription factors [BR:
vem03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105566760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
bHLH_HIF1A
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
105566760
NCBI-ProteinID:
XP_011876410
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MHRGGGSAGGAAGGGIVGGAGGSHRALELEHPSAMPGAPGFHWGAMFAGHHAAAAAGMMQ
PPMSAGGEYVPAAAHHGPAHPAMPMDLHVHQGFPYFPTRYRDDALCWTDRKPSMDDVGNP
TSVNARFEERHYAFESILELRKEKSRDAARSRRGKENFEFYELAKMLPLPAAITSQLDKA
SIIRLTISYLKLRDFSSHGDPPWSREGPPPSKSVKGANRVRASSTTTIDHFEIHQGTHIL
QSLDGFAMAVAADGRFLYISETVSIYLGLSQVEMTGSSVFDYVHQQDHAEVAEQLGLGLA
SSTSTSAPHSSNSGLASPSSGASEEHGSSSTANPDVSSVMSLTSTGLYKGYDRAFCVRMK
STLTKRGCHFKSSGYRVVLLLCRLRPQFIFNHTRKSAPPLMGMVGLAIALPPPSVHEIRL
ETDMFVTRISFDFRIAHCEPKVSELLDYTADELTGKNLYTLCHGEDANRLRKSHIDLINK
GQVLTHYYRLMNKSGGFTWLQTCATVVCNSKNAEEQNIICVNYVISGREYENLIMDCCQL
EDGVTGVKREDTAGNDPENGSPDADRGEGRSRGGPTNQHQEQSHRSPPEEREESHASESE
KRGSRHHDNIAQLQQESQTAVGNLGTLVVRLRGHKRKIQDDDSSSNEEEDEEEATAKESN
GERTHALSPSATSTHSISATEQALCSASPKSRRAEGSRMDSAESTGTSVKDLEQAMSKHL
PGSSLKSNSPAALHQPTDFSTDALLKQQQQRSTIQWIGAHHHLGHLSPQQSAAAPLPASA
LLRQLYAANRESVIRANVHGITSSGGTRAPTSAGIYYPGETAPNGPLPTPPGSEGSSTYG
EHQFVLAAHNQKASNGTSCADAFTSLVSSYTSATAAGYSVDYHSAMTPPSSVSPRDKQQQ
QQQQQQQQQQQQQQQQLHPVISSYEGSSAYAEPVLRHQYEPAQPLPLKPQVYSATVHPSA
LDAAAAYASAGLTEQSQFYHHPASSAGFHIYHPSNKSTANGWYTSAS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcggaggcggaagtgccggaggcgcagccgggggtggtatcgtcggtggtgcc
ggcggaagtcaccgtgccctcgaactagagcatccgtcggcgatgccgggtgcaccgggt
ttccattggggggccatgttcgcgggtcaccacgcggctgccgccgcgggtatgatgcag
ccccccatgtcagcgggtggtgagtacgtgccagccgcggcacatcatggtcccgctcat
cccgcgatgcccatggatctacacgtccatcagggattcccctacttccctaccaggtat
cgagatgacgcgctctgctggacagacaggaaaccgtccatggacgacgtcggaaaccct
acctccgtcaacgcacgatttgaggagagacactacgctttcgaaagcatcttggagttg
cgcaaggagaagagccgggacgcggcgaggtcgcggcggggtaaagagaactttgagttc
tacgagctcgcaaaaatgctaccactcccagcagccatcacctcccagctagacaaggcc
tccataataaggctaacgatctcgtacctcaaactacgcgacttctccagtcacggcgat
ccgccgtggtcccgcgaaggtccaccgcccagcaaatccgtcaaaggtgctaaccgagtc
agagcatcgtcgactacaacgatagatcatttcgaaattcatcaaggtacccacatatta
cagtccctggacggctttgcgatggctgtcgcggctgatggtagattcctgtacatatcc
gagaccgtttcgatatatctcggcctctcacaggtagagatgacggggtcgagcgttttc
gactacgttcatcagcaggatcacgccgaggtcgcagagcagctcggtctgggtcttgcg
tcgtcgacgagcacctcggccccgcactcgtccaattccggtctggcctcgcctagcagc
ggcgcctcggaggagcacggttcatcctccactgcaaatcccgacgtgtcctcggtaatg
tcgctgacgtcgaccggactctacaaggggtacgatcgggcgttttgcgttaggatgaaa
tccactctgacgaagagggggtgtcatttcaagtcgtcgggttatcgggtcgtgctgttg
ctgtgtcgtttgaggccgcaatttatattcaaccacacaagaaagtccgcgccgcctttg
atgggcatggtcgggctggctatcgcgcttccacctcccagcgtgcacgaaattcgtctt
gagaccgatatgttcgtcacacggatcagtttcgactttcggatagcgcattgcgaacca
aaggtgtccgaattgctggactacactgccgacgaattgacggggaagaatctctacacg
ctgtgccacggcgaggacgcgaatcgtctccggaagtctcacatagatctgatcaataaa
ggacaagtgctgacgcattactatcggctgatgaacaagagcggtggattcacgtggcta
cagacgtgcgccaccgtcgtgtgcaattcgaaaaatgccgaagaacaaaatatcatttgc
gtcaattatgtcataagcggtcgagaatacgaaaatttaattatggactgctgtcagtta
gaggacggcgttaccggcgtcaagagggaagatacagccgggaatgatccggagaacgga
tcgccggacgctgacagaggagagggtcgtagtcgaggcggccctacgaatcagcatcaa
gagcaatcgcatcggtcgccacccgaggaacgggaggagagccatgcgtcggaaagcgag
aaacgaggtagccggcatcacgacaatatagcccagttgcaacaggagtcgcaaacagcg
gtcgggaatctcggcacgctcgtagtgagattgcgagggcataaacggaaaattcaagat
gacgacagcagctccaacgaagaggaggacgaggaggaggctacggcgaaggaatcgaat
ggcgagagaacccacgcgcttagtcctagcgcgacatccacgcactcaatctcggccacc
gaacaggcgctctgttcagcgagtccaaagtcgcgtcgcgccgagggcagcaggatggat
agcgccgagagcacgggaacttcggtgaaagacttggagcaggctatgtcgaaacacctg
ccggggagctcgctaaagtcaaactcaccggcagcgcttcaccagccaacagatttcagc
acagacgcgttattaaagcagcagcagcagcgaagtacaatacaatggatcggcgcgcat
catcatctaggccatctaagtccgcagcagtctgctgccgcccctttacccgcttccgcg
cttcttagacaactttacgctgccaatcgggagagcgtgatacgcgctaatgtgcacggg
attacgtcaagcggcggtacgcgcgctcccacatcggccggtatctactacccgggcgaa
accgcccctaatggacctctgcccacgccaccgggctcggagggttctagtacgtacggt
gagcaccaatttgtgctcgctgctcacaatcaaaaagcatcaaatggcaccagctgcgcc
gacgctttcaccagtctagtttcatcgtacacgtccgctactgcggccggctactcggta
gactatcattcagcaatgacgccgccatcgtcggtctcgccgcgggacaagcagcaacag
cagcagcagcagcaacaacaacagcagcaacagcagcagcagcagcaattgcatcccgtg
ataagcagctacgaaggctcgtcggcgtacgcggagcccgttcttcgtcaccaatacgaa
ccggcccagccgttacccttgaaaccccaggtgtactcggccactgtccatccgagtgcc
ttagacgccgcagcggcatacgcctcggcaggtctgacggaacaatcgcagttctaccat
catccggccagtagcgccggcttccacatctaccacccgagcaacaagtcaacggcgaac
ggctggtacacctcggcctcctag
DBGET
integrated database retrieval system
