Vollenhovia emeryi: 105566957
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Entry
105566957 CDS
T06016
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
vem
Vollenhovia emeryi
Pathway
vem04120
Ubiquitin mediated proteolysis
vem04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105566957
04120 Ubiquitin mediated proteolysis
105566957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vem04121
]
105566957
Enzymes [BR:
vem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105566957
Ubiquitin system [BR:
vem04121
]
Ubiquitin ligases (E3)
U-box type E3
105566957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
105566957
NCBI-ProteinID:
XP_011876805
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MSELSQEEMRRRRLARLEGLNNSNAAASSSNAIAPTSPSTPEPSKAFAGSISPSIQQQLQ
HAEVPMEIEESNDKQCNITEMDTSGIENMEVDESDRKDSIPRSRMASTSTEVTADHVHVV
ISRVLRISWKSPMEGTIFLPQTAAYTLKQRQLDFSEVINQALMEILCMFSKAEDPLKDVT
VDMSSDRQDSPNNQASPLPSPVVALPSVPLPIGSKSSQPKSFTYLLDCYSRVAVEERNHP
KRSSIPPLSDVLTVLKTQCVQYSSLVLQGLVGICQASVVPMCTTYLLYPILSEDLPRGYL
HELVARTYTSPSTFNKIFTPVLQGLYLSMQQASLVGSTHRRPIEVLEELIEIRCGPSGNI
RPICRLITNQVQFLPNIMTSAAGRELTRTSFLGPFLSITVFAEEQPQVAEKFFSGNPVTD
KTVNLALQQELESTRTLLHKMLLAILANSTCRDTTLTYLAALLRHNEKRAQIQTEEFSLA
GDGFMLNLLSVLQMLSVKIKLDTVDPLYPFHPSSLVEIKNDTRLKLTSQEVAEWQKRLEK
THKWTESKFPTQCWFLTLHCHHIALLPALQKYQRKLRALRDLQKMLDELQATEPQWKDSP
YAEHNKDLIKQWKQQLKRLVKSKSCADAGLIDPVFLRRCLHFYISVAEILLSLLTQTAPG
NPLPKLPLPQEVTCKFTALPEWYVEDIAEFLLFTLQFCPVVVANNMDNSLITWLLVVVCT
PHCIRNPYLIAKIIEVLFVINPSVQGRTETLHDKVMAHPISKTLLASYLMKFYTDVETTG
SSSEFYDKFSIRYHISLILKSMWDSPVHRTSIVNESNNGKQFVKFVNMLMNDTTFLLDES
LESLKRIHEVQELMSDTNAWGALSQEQQQSRTRQLAADERQARSYLTLAKETVAMFHYLT
VDIKEPFLRPELVGRLCAMLNFNLQQLCGPKCKNLRVRKPQKYGWQPRTLLSQLVDIYLH
LDCDNFAAALASDERSFCKELFTDAASRLERSAIKTTTEIERFIALAERAAIIARDNRAR
DADYGDAPEEFRDPLMDTLMEDPVKLPSGIVMDKAVIIRHLLNSATDPFSRQPLSEDMLT
PMLDLKERISVWKQQKKKSTNI
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctaagccaggaagagatgaggagaaggcggttagcccgcttggagggctta
aacaatagcaatgcagctgccagttcgtctaatgctattgctccaacttccccaagcact
ccggagccgtcgaaggcatttgcagggtcaatatctccgtctattcagcaacaattgcag
catgccgaggtaccaatggaaatagaggaaagcaacgataaacagtgtaacattactgaa
atggatacttcaggaattgaaaacatggaggttgacgaatcggataggaaagactcgata
ccaagatcacgcatggcgagtaccagcacagaagttacagcagatcacgtacatgttgtc
atatcacgtgtcttgcgcatatcgtggaaaagccccatggagggaactatattcttgccg
cagacagcggcgtacacgctaaaacaaagacagctggattttagtgaagtcatcaaccag
gccttgatggagattctgtgtatgttctcgaaagcggaggatcccttgaaggacgtcacg
gtagatatgtcgtccgatcgacaggacagtccgaataatcaggcgagtcctctgccaagt
cccgtcgtggctcttccgtctgtgccattgcccataggcagcaagtcgtcgcaaccgaaa
agtttcacttacttgttggactgttactcgagagtcgcggttgaagagagaaatcatcca
aagcggtccagcataccaccactttccgacgtattgacggttttgaaaacgcaatgtgtt
cagtactccagcctcgtcctacagggattggttggcatttgtcaagcttcagttgtcccg
atgtgcaccacttatcttctatatccgatactgtcggaagacttacctcgaggctatctt
cacgagctcgtggctaggacgtacacgagcccgagcacattcaataagatattcactcca
gttttgcaaggcttgtatctctcgatgcaacaggcgagcctggtcggtagtacacacaga
agaccgatcgaggtgctggaggaactcatagagattcgctgcggaccaagcggcaacata
cgtccaatatgccgtctgattacgaatcaagtgcaattcttgcccaacattatgacgtca
gccgccggtagggagctcacgaggacttcgtttttggggccgtttctctcaataacagtg
tttgccgaggaacaacctcaggtcgcggagaagttcttcagtggaaatcccgttacggat
aaaacggtgaatttggccttgcagcaagaattggaaagtactagaacattgttgcacaag
atgttgctcgcgatacttgcgaacagcacttgtcgcgatactactttaacgtacttagcc
gcattgctacgtcacaatgagaaacgcgctcagatacagaccgaggagttctctctggcc
ggggatggatttatgttgaatctactgtcggtcttgcaaatgctctctgtgaaaatcaag
ctggacaccgtagaccctctgtatccgtttcatccttccagcctcgtcgagatcaagaac
gacacaagactgaaactcacttcgcaggaggtcgcggaatggcagaagcgtttagaaaag
acgcacaagtggacggaatccaagtttcccactcagtgctggtttctgacgttgcattgc
catcatatcgcgctgctgccggcgttgcaaaagtatcagagaaaattacgggcgttgcgc
gacttacagaagatgctcgacgaactgcaagccacggaaccccagtggaaggacagcccc
tacgcggaacataacaaagacttaattaagcagtggaagcagcaattgaagcgattagtt
aaatccaaatcgtgcgcggacgcgggcctgatagacccggtctttttaagaagatgctta
cacttttatatatctgtggctgagattttgctgagtcttctgacgcagaccgccccgggt
aaccctctccccaaacttccgcttcctcaggaagttacgtgcaagtttaccgcactaccg
gaatggtatgtggaggatatagcggaattcttgttgttcacgctccaattttgtcccgtc
gtagtggcaaataatatggacaattcgcttatcacgtggttactggtcgtcgtgtgtacg
ccgcattgtatacgaaatccgtatctaatcgcaaaaatcatcgaggtcctctttgtgata
aatcctagtgttcagggaagaacggagaccctgcacgacaaggtcatggcgcatcccata
tccaagacacttctggcgtcgtacctcatgaaattttacaccgacgttgaaaccactggt
tccagttcagagttctatgataaattctcaatacgctatcacataagtctgatcttgaag
tctatgtgggacagcccggtacatcgaacgtctatcgtcaatgagagcaataacggcaag
caattcgtcaagttcgtcaacatgctgatgaacgacaccaccttcttgcttgacgagagc
ctggaatctctgaagcgcatacacgaggtgcaggaactcatgtcggacactaacgcatgg
ggcgcgttatcccaggagcaacagcagtcgaggacgaggcagctggcagcggacgagaga
caagccaggtcctatcttacactagccaaggaaacagttgccatgtttcactatctgacg
gtcgacattaaggagccattcctccggccggaattagtcgggcgattgtgtgccatgcta
aacttcaatttgcaacagttgtgcggacctaagtgcaaaaatttgagagtgcgaaagccg
cagaagtacgggtggcaaccaaggacgttactcagccaattggttgatatatatttgcat
cttgactgtgataatttcgcggccgctctagccagtgacgaacgttcgttctgcaaagag
ttattcacggacgctgcgagcagattagaaagatccgcgatcaaaactaccacggaaatc
gagagattcatagcgctcgcggagcgtgcggcgataatcgcgagagataatcgcgcgcgc
gacgcagactacggtgacgctcctgaggaattccgagatccgttaatggacactcttatg
gaggatccagtcaaactaccatctggtattgttatggacaaggcagttatcattagacat
ttactcaatagcgccacagatcctttcagtcggcagccacttagcgaagacatgctcaca
ccaatgctcgacttgaaagaaagaatatctgtgtggaagcagcaaaagaaaaagtcgacg
aatatataa
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integrated database retrieval system
