Vollenhovia emeryi: 105567307
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Entry
105567307 CDS
T06016
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
vem
Vollenhovia emeryi
Pathway
vem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105567307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vem03019
]
105567307
Messenger RNA biogenesis [BR:
vem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105567307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
105567307
NCBI-ProteinID:
XP_011877469
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MSRHRDVRSMNYSDEYDGYDDVYGHSMEDDYCVSPSVEQFLFDRSKQQNIASFITEPDIV
EDNEDIDESLPASDQEKCNLSELERAKLVSCLETIRNVIGDTVSDSKLKEKIILSNFDAN
TALDAILKESSPKQDSAVNKKRLERHPGNKLSAKPTLQVTTPSTVKVVPTGTKPVVKGFD
LSGVENTDLLSPRCESPSSNRNSPEIKRKDVQKERSTASSKTNSPRCQSPVSGHVTPELD
SKVKSSASNEEKVDVEAIYKNKRGDGKEQLHLVVVGHVDAGKSTLLGRLLCDLGQVPQRL
IHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDIGHSKFETDTKCITLLDAPGHKDF
IPNMISGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVLQLAVVVNKLDTV
NWSKDRFNEIVDKMSVFLKQAGFKDTVTFVPCSGLSGENIVTKPKEQLSNWYTGPTLVNI
IDNFKCPERPLNKPFRFSVNDIFKGTGSGFCVSGHVETGMVSVGDKVLILPQNEIAVIKG
LQSDEVSTTNAFAGDHVALTLAGIEQQNVGIGDIICNPQNPVPVTTCFQAHVVIFAIAKP
ITKGLPVVMHQQSLVQPAVVTKLIAQLNRSTGDVIKKKPRCLPKNSSAIIEVATQTPVCM
ELYKDTKQLGRVMLRLEGTTIAAGLITKIL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcatcgagacgtccgttctatgaattactcagacgagtacgatggctacgac
gatgtttatgggcattcaatggaagacgattattgcgtatcacctagtgtggagcagttt
ttatttgatcgaagcaaacaacagaatattgcttcgttcatcacagagccagatatagtg
gaggacaatgaagatatcgacgagtctctgccggcgtctgaccaagagaagtgtaacctt
tctgaattagagagggcaaagttagtatcttgcttggaaacaattagaaatgttataggt
gacaccgtgtccgattctaaattgaaggagaagattattctgtcgaatttcgatgcgaac
acagcgcttgatgccattttgaaggaatcgtcgccgaaacaagattccgcggtgaataag
aaacgattggagcgacatccaggtaacaaattatcagcgaaacctacgttgcaagttaca
acaccgtctactgtaaaagtcgtaccgaccggcacaaaacctgttgtgaagggttttgac
ttaagcggcgtagaaaacacagacttactgagtccacgttgtgagagcccatcttccaat
cggaatagtcctgaaatcaaacgcaaagatgtacaaaaggagagaagtacagcctcgtcg
aaaacgaatagtccgagatgccagtcacccgtgtcggggcatgtaacaccagaattggac
tccaaagtaaaatctagtgcatctaacgaagagaaagtggacgtcgaggcgatatacaag
aataaaagaggcgatggcaaggaacagcttcacttggtagtcgtgggacatgttgatgct
gggaaaagcacattgcttggacgattgctctgcgatttgggtcaagtgccacaaagactt
atccataaatatcaacaagagagcaagaagataggaaagcagtcatttgcctatgcttgg
gtactcgatgaaaccggtgaagaaagagagcgaggaataacgatggacataggccactcg
aagttcgaaacagacacaaaatgtatcactctcctagatgcacctggtcacaaggatttt
attccaaatatgataagtggtgctacgcaagcggatgtagctttgttggtagtcgacgca
accagaggcgaatttgaaactggattcgacagcggtggacaaacgcgcgaacacgctctg
ttattacgctctttaggagtattgcaactggcagtagtggttaacaagttagatactgtc
aattggtctaaagatagattcaatgagatagtggacaaaatgagtgtgttcctgaaacaa
gctggcttcaaggataccgtcaccttcgtaccttgcagcggtttatctggagagaacatt
gtaacaaaaccaaaggaacagctctctaattggtataccggacctactctagtcaacatt
attgataatttcaagtgcccagagcggcctttaaataaaccattccgtttttcggtcaat
gacatatttaaaggcactggatctggattctgtgtatccggtcatgttgaaactggtatg
gtatcagtgggtgacaaggttttaatactacctcaaaatgaaattgcagtcatcaaaggt
ctccaatcggatgaagtttcgacgacaaatgcgtttgccggtgatcatgttgccctgaca
ttagcagggattgagcaacaaaacgtgggtatcggcgatatcatctgtaatccgcagaat
ccagtacccgtaacaacctgctttcaagcgcacgttgttatattcgcaattgcgaaaccg
atcacgaaggggcttccagtggtgatgcaccagcagtctttggtacagccggcggttgtt
acaaaattaatagcgcaacttaatcgaagtaccggtgacgtgatcaagaagaagccacgt
tgtttgccgaaaaattctagcgctattattgaggtcgcaacgcaaacgccagtctgcatg
gaattgtacaaggatactaaacagctaggtagagttatgttgcgattagaaggtaccacc
attgcagctggtctaattacgaaaattttgtaa
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