KEGG   Vollenhovia emeryi: 105567480
Entry
105567480         CDS       T06016                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
vem  Vollenhovia emeryi
Pathway
vem03030  DNA replication
vem03410  Base excision repair
vem03420  Nucleotide excision repair
vem03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105567480
   03410 Base excision repair
    105567480
   03420 Nucleotide excision repair
    105567480
   03430 Mismatch repair
    105567480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vem03032]
    105567480
   03036 Chromosome and associated proteins [BR:vem03036]
    105567480
   03400 DNA repair and recombination proteins [BR:vem03400]
    105567480
DNA replication proteins [BR:vem03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105567480
  DNA Replication Termination Factors
   ELG1-RFC complex
    105567480
Chromosome and associated proteins [BR:vem03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105567480
DNA repair and recombination proteins [BR:vem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105567480
  Check point factors
   HRAD17(Rad24)-RFC complex
    105567480
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_16 Rad17 AAA_14 AAA_11 bpMoxR AAA_22 RuvB_N DUF815 AAA_assoc_2 AAA_30 ResIII AAA_5 AAA_7 AAA_24 AAA_2 Mg_chelatase NB-ARC AAA_19 DNAX_ATPase_lid Gp44_lid Bac_DnaA TniB RNA_helicase AAA_28 ATPase_2 AAA_29
Other DBs
NCBI-GeneID: 105567480
NCBI-ProteinID: XP_011877772
LinkDB
Position
Unknown
AA seq 356 aa
MHAFLKTGKLGAPAEAKKPSTSRAKDDRKNLTPWVEKYRPKSVDDIVEQTEVVNVIRQAM
EHGDFPNMLFYGPPGTGKTSIIHAAARQMFGSIYKERILELNASDDRGIQVVRDKIKSFA
LRKANPNGPDGRKCPPFKIIILDEADSMTGAAQTALRRIIEKESHSTRFCLVCNYLSRII
KPIASRCTKFRFKPLSDEKSIARLEYICNEENLKADRKVLERIVEASGGDLRQAVMCLQS
ITRLKGKEYEITVDDALDVIGLVPDDQINALWEACNKRKYIDMQKLLENLLLEGYPGSQV
IEQLNEKIIFSDELTDKQKAIIGDVLGKCDFRLTEGSDEYLQLLNLFSTILMALKS
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcacgctttcctcaagaccgggaagctgggcgctccggcggaggccaagaaaccctcg
acttcccgggccaaggacgacaggaagaacctgacgccatgggtggagaaataccgaccg
aaaagcgtcgacgacattgtggagcagacggaggtggtgaacgtgatacggcaggccatg
gagcacggggattttcccaacatgctgttctacgggccgccgggcaccggcaagaccagc
atcatccacgcggccgcgaggcagatgttcggcagcatctacaaagagaggatactggag
ctcaacgcctccgacgacaggggcattcaggttgtgagggacaagatcaagtcctttgcg
ctgcgcaaggccaatcctaacgggccggacgggagaaaatgtccgccattcaagatcatc
atactggacgaggcggacagtatgaccggcgccgcgcaaacggcgctccgtcgaatcata
gagaaagagtcgcacagcacgcgcttctgcttggtgtgcaattacctgtcgcggatcatc
aagccgatagcgtcgcgctgcaccaaattccggttcaagccgctgagcgacgagaagagt
atcgccaggctcgagtacatatgcaacgaggaaaatctaaaggccgacaggaaggtcttg
gagaggatcgtcgaggcgtcgggcggcgatctgagacaggccgtcatgtgcctgcaatcg
atcacgcgactaaagggaaaggagtacgagatcaccgtggacgacgcgctcgacgttatc
gggttggttcccgacgatcaaattaatgcgctgtgggaggcttgtaacaagaggaaatac
attgatatgcagaagttacttgagaatttgctacttgaaggatatccgggttcgcaggta
attgaacaattgaacgagaaaattatcttctccgacgaacttactgacaaacaaaaagcg
attattggcgatgtacttgggaaatgtgatttcagattaacagaaggaagcgacgagtat
ctgcagcttctaaacttgttttctactatcttgatggcgttgaagtcttaa

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