Vollenhovia emeryi: 105568319
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Entry
105568319 CDS
T06016
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vem
Vollenhovia emeryi
Pathway
vem03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105568319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vem03019
]
105568319
03009 Ribosome biogenesis [BR:
vem03009
]
105568319
03036 Chromosome and associated proteins [BR:
vem03036
]
105568319
Enzymes [BR:
vem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
105568319
Messenger RNA biogenesis [BR:
vem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
105568319
Ribosome biogenesis [BR:
vem03009
]
Eukaryotic type
90S particles
RNase
105568319
Prokaryotic type
rRNA processing factors
105568319
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
105568319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
105568319
NCBI-ProteinID:
XP_011879288
LinkDB
All DBs
Position
Unknown
AA seq
1341 aa
AA seq
DB search
MTEPSSMNTGQTYCWNAEANQQNAEYYSIPQVSDFPDYTQPPNYNPPYAYDSSYSVPPPA
VPSIPHPDVSNVRPHVNPTNTMHHFTSSAYHEASFSPNIAYQHQTDPLYNSRYCGGADST
PHEYMREEYGNWNATSNNAYNDNAGSEWHSNNSSTSWTTYENTYAAWYDPSATSYDRERL
CPTQDVYKTSQKVDENLKWKYENSLDDRKVLSKYTATRQGSRDPYGKQEKVYRSQYEKPR
DRHRQHDREMSSSRDSVHDSRHLEKSSPKKHGSYTSRAEGSGSSSSSSGNRKRSKSQEPH
STRDSTSTKRTKGPTEREILLAKYRRNYCATSKDIKRKMNELSAMGSKSLPEIEKRIWTR
TSPADLYYVRDENNSKIMKTSPKLQELCTIFKKVLIDRAAAARELQPPYEPPPRKTRARL
CRHKSEACSSSSSDSDTSMDEDDRTMEELMAKKQHPQRLHPEMWFNDPGEMNDGPLCRCS
AKSRRSGIRHGIYAGEGAINKCDLNTNNADKLYHYRITISPPTNFLTKTPTIVKHDEHEF
IFEGFSMLSHFPLVKLPTCKVIRFNIEYTILYIEEKLPENFTILELDYFQTFLFREILEL
VDFDLHAAQDKSGCGQFHFMPRFVRDLSDDGQEILSMNEVLNYLIKSSTLLINPDDLTRL
VAMPQYKWQDFADEVKGMVVTYPGKKPCSVRVDQLDRNQEDQLSDKVSTAYPEIVHFGIR
PPQLSYAGNADYQKAWRDYVKFRHLLANMSKPSFEDKRKLEAKENKLQELRTQSKMKRDV
TVDVSSEGFYRTGIMCDIVQHAMLIPVLVCHLRFHKSLDNLERTLGYEFKNRYLLQLALT
HPSYRENFGTNPDHARNSLTNCGIRQPEYGDRRIHYMNTRKRGINTLINIMSRFGAKTET
ESSIAHNERLEFLGDAVVEFLTSIHLFHMFPELEEGGLATYRAAIVQNQHLAVLAKKLNL
EEYMLYAHGSDLCHDLELRHAMANCFEALMGSLFLDGGIEVADRVFGETLFKDEEDLAKV
WVNYPRHPLQEQEPTGDRQWISSFELLQKLTKFEESIGVEFTHIRLLARAFTDRSIGYTN
LTLGSNQRLEFLGDTVLQLIVSEYLYKFFPEHHEGHLSLLRSSLVNNKTQAVVCDDLGMT
QYALYGNPKAELKTKDRADLLEAFLGALYVDKGLKYCHVFCDVCFFPRLQDFIMNQDWND
PKSKLQQCCLTLRTMDGGEPDIPVYKVIECKGPTNTRVYTVAVYFQGKRLATASGHSIQE
AEMNSAKEALEKSQDLFPQLDHQKRVIAKSMKLQQWPNKQKIKRKSDKRFSVHDRSDDSD
CSQSRRRSRSRERNTSKKRDT
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaccttcatcgatgaatacaggccagacgtattgctggaacgcagaggcaaac
cagcagaatgccgagtattactcgattccccaagtgtcggactttcccgactacactcag
cctcccaattataaccctccgtatgcttacgactcttcgtattccgtacctcctcccgcc
gtgccgagtatccctcatccggatgtgtcgaatgttcgtccccatgtcaacccgacgaat
acgatgcaccacttcacgtcctctgcctaccacgaggccagtttttcccccaatatcgct
taccagcatcagacggatccactgtacaacagtcggtattgtggcggagctgattccacg
cctcacgaatacatgagagaagaatatggaaactggaatgctacgtccaataacgcgtat
aatgacaacgctggtagcgaatggcactctaacaactcctctacgagctggacgacgtat
gaaaatacatatgctgcatggtacgaccctagcgcgacgtcttacgacagagaaagattg
tgtccgacgcaagacgtgtacaagacgtcgcaaaaggtggacgagaatcttaaatggaag
tatgaaaacagcttggacgacaggaaagtattgtccaagtacacggctaccagacaggga
tctagggatccgtatggcaaacaggagaaagtatatagatcgcaatacgagaagcccaga
gatagacatcgtcagcacgatagggagatgtccagttcgagagactctgtgcacgatagc
aggcaccttgaaaagtcctcgcctaagaaacacgggagttatacatctcgtgcggaagga
agcggtagcagcagcagcagcagcggcaacaggaaaagatccaaatcgcaggagcctcat
tcaactagagactctacgtcgactaaacggacgaagggtcctactgagagggagatattg
ttggcaaaatatagacgtaattattgtgcaacgagcaaggatataaagcgaaagatgaac
gaattgtcggcaatggggtctaagagtttacctgaaattgagaaaaggatttggacgcgc
acgtcgccggcggatctttactatgtcagggatgagaataattcgaaaataatgaaaact
agtcctaagctacaggagttgtgcacgatatttaagaaagtgctaatagacagagcagca
gcagccagagaattgcagccaccttacgaaccacctccgagaaaaacaagagcgcgtctt
tgtcgtcacaagtctgaagcctgtagtagctcttcatccgatagcgacacttctatggat
gaagatgataggacgatggaagagttaatggcaaagaaacagcatccacaaagattgcat
cctgaaatgtggtttaatgatcctggagaaatgaacgacggcccattatgcagatgcagc
gcgaaatcgaggcgctcgggtataagacacggaatttatgcgggagaaggtgcaataaac
aaatgtgacttaaatacgaataatgcggataaattgtatcactatagaataacgatcagt
ccgccgacaaattttctgaccaagacaccgacgattgtcaagcatgacgagcatgaattt
atatttgaaggcttctccatgctttctcacttcccactggttaaattacccacgtgtaaa
gttattaggtttaatatcgaatacacaattctgtacatagaagagaaattgccggagaat
tttacaatactggaactggactactttcaaacgtttttattcagagagattttagagctt
gtggatttcgacctacacgcggcacaggacaaatccggttgcggacaattccattttatg
ccgcgatttgtacgcgacttatccgacgacggtcaagagatcctatcgatgaacgaagtc
ctgaattatttgataaagagcagtaccttgttaataaatccagacgatctgactagattg
gtggcgatgccacaatacaagtggcaagattttgctgacgaggtcaagggaatggtcgtg
acgtatccggggaaaaaaccgtgtagcgttcgtgttgatcagctggatagaaatcaagaa
gaccaattatccgataaagtatcgactgcttatcccgagatcgttcactttggtattcgt
ccaccacaacttagctacgcaggaaatgcagactaccaaaaagcctggagagattacgtc
aagtttcggcatctactcgcaaacatgtcgaagccgtccttcgaagataagagaaaatta
gaggcaaaggagaacaagttgcaggagttgcgtacccagagcaagatgaagcgcgatgtc
acggtcgacgtcagctccgaaggattttacagaaccggcattatgtgcgacatcgtgcag
cacgcgatgttgataccggtgctagtctgccacttgaggttccacaagtccctggacaat
ctggaacgcacgttgggatacgaattcaaaaacagatacctgctccagctggctctcacg
catcccagctaccgtgagaattttggcacaaatccggatcacgcgcggaactccctgacg
aattgcggcataaggcagcccgagtacggcgaccgcagaatccactacatgaacacgcgc
aaacgcggcatcaacacgctgatcaacataatgtccagattcggcgcgaaaactgaaacg
gagtcgtcgatagcgcacaacgaacggctagaatttctcggcgacgcggtcgtcgagttc
ctcacctccatccatctcttccatatgtttccggagttggaggagggcggcttggctact
tacagagcggcgatcgtgcaaaatcagcatctcgccgtgttggcgaagaaactgaatctg
gaggagtacatgctctacgctcacggtagcgatctctgccacgacctggagctgcggcat
gcaatggccaattgcttcgaagcgttgatgggctcgctgtttcttgacggagggatagaa
gtggccgatcgggtctttggagagactcttttcaaagacgaagaggatcttgccaaagta
tgggtgaattatccacgacacccccttcaagagcaggaaccgacgggagataggcagtgg
atttccagcttcgagttgttgcagaaattgaccaagttcgaggaatcaattggagtagaa
ttcactcatattcgtcttcttgctagagcattcacagatcgtagtataggatatactaat
ttaacgctaggatctaatcaaagactagagttcctaggagacactgtgttacagcttatt
gtttccgagtatctgtacaagttctttcctgaacatcatgaaggacatttatcgttgttg
cggagctccctcgtaaataataaaacacaagcggttgtttgcgacgatctcggtatgact
cagtacgcgctttacgggaatccgaaagccgaattgaagacaaaggacagagcagattta
ttagaagcctttcttggcgcactttatgtcgataagggtttaaaatattgtcacgtgttt
tgtgacgtatgcttcttcccgcgcttgcaagattttatcatgaatcaagactggaatgat
ccaaagagcaagttacaacagtgttgtttaactttgagaactatggacggtggcgagcca
gatattcctgtatacaaagtcattgagtgtaaaggaccaactaatacaagggtgtataca
gtcgctgtatatttccaagggaaacggctggctacagcttcaggacacagtatccaagaa
gcggaaatgaactctgccaaagaagctttagaaaaatcacaagatttatttccgcaactg
gatcaccaaaaacgtgtaatagcaaaaagtatgaagctgcaacaatggccgaataaacag
aaaataaagagaaaatctgacaaaaggttctctgtccacgatagatccgatgattctgac
tgtagtcaaagtcgaagaagaagtcgtagcagagaacgtaatacctcgaaaaagagagat
acttag
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integrated database retrieval system
