Vollenhovia emeryi: 105568420
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Entry
105568420 CDS
T06016
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
vem
Vollenhovia emeryi
Pathway
vem03022
Basal transcription factors
vem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105568420
09124 Replication and repair
03420 Nucleotide excision repair
105568420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vem03021
]
105568420
03400 DNA repair and recombination proteins [BR:
vem03400
]
105568420
Transcription machinery [BR:
vem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105568420
DNA repair and recombination proteins [BR:
vem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105568420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Cys_box
Motif
Other DBs
NCBI-GeneID:
105568420
NCBI-ProteinID:
XP_011879476
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MDAFRITRCQFLLLTKIETSLLVIVLDVNPMQRIVKQETKILSQCLDSTIVFANAHLMQS
SNNELAIMACHSHSAKFLYPCENVVEIRQMDGQYEKFTMVERMVRQQLQQVINEIPMDVP
LSTESLISGALSMALCYIARLEREKVPSQKLHPRILVITASNDSATQYMNYMNIFFTAQR
MNVILDVCSLDQELTLLQQGCDISGGNYLKVPQLPGLLQYLLWVFLPDPSVRSKLVLPPP
VKVDYRAACFCHQELIDIGYVCSICLSIFCKFSPICTTCHTVFKMPGPMPMKKKKKKNVD
LVH
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatgccttccgaatcacaagatgtcaatttttgttgctgacaaaaatagagacgagc
ctgctggtgatcgtcctggacgttaatccaatgcagcggatagtgaagcaggagacgaag
atactgtcgcaatgtttagactccacgatcgtcttcgccaatgctcatcttatgcaatcg
tccaataacgaactggcgataatggcgtgtcacagccacagcgccaagttcctctatcct
tgcgagaacgtggtggagatcagacagatggacgggcagtatgagaagtttaccatggtg
gagcgcatggtgcgtcagcagttgcagcaggtcatcaatgagatccccatggatgtcccg
ttgagcacggagagcctcatctccggcgcgctcagtatggcgttgtgctacatcgcccgg
ttggagcgagagaaggtccccagccagaagctgcaccccagaatactggtgatcaccgcc
agcaacgactcggccactcagtacatgaactacatgaacatattcttcaccgcgcagaga
atgaatgttattttggatgtatgcagtctggatcaggagctgacgctcttgcagcagggc
tgcgacatcagcggcggcaactacctgaaggtgccgcagcttcctggattgctgcagtat
ttactatgggtgtttctgccggatcctagcgttaggtcgaaattagttcttcctccgccg
gtgaaggtggattacagggcagcgtgcttttgccaccaggaacttatcgatattggatat
gtctgttccatatgtttgtcaatcttctgcaaattcagtccgatatgcacgacttgtcac
acggtattcaagatgccaggaccaatgccgatgaagaaaaagaagaagaagaacgtggat
ctcgtccattaa
DBGET
integrated database retrieval system
