Vollenhovia emeryi: 105568963
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Entry
105568963 CDS
T06016
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
vem
Vollenhovia emeryi
Pathway
vem03460
Fanconi anemia pathway
vem04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105568963
09124 Replication and repair
03460 Fanconi anemia pathway
105568963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vem04121
]
105568963
03400 DNA repair and recombination proteins [BR:
vem03400
]
105568963
Enzymes [BR:
vem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105568963
Ubiquitin system [BR:
vem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105568963
DNA repair and recombination proteins [BR:
vem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
105568963
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
zf-RING_2
SLX1_C
PHD_NSD
RINGv
AATF-Che1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
105568963
NCBI-ProteinID:
XP_011880434
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MAVRCNRNYEAIWDWHPEMILVSESPVTWKGFLIVSHSSYVAGDARCSRVKLKLAMPDYP
SFDNAQIAFGRHIALLRNREFSRRVKDLMTSAQTVLSFFTQLQSLVSQYMLNTDSKSRMI
DFKSTRDFLQDVRTALQNPSNVQLSSDRDLNTIKLSLRGVSLTLQRCNDVGAPWKVVSSD
MPAIPTFEKNVTNLSIAMTKFKWQVELLERAWEQLREIDENCWVIDPPEPNKSHMYRRIH
LSQSLSVTITIDPLNPTVLQSITFSGSDNEVKRQKEEVNNNLKNWNRDCNILENLRIMLN
TYEFPEQQESMDDSKGIIGSRECGICFSEKSETDELPHKICNNERCMKHFHSACLSRWLQ
MNAENQVVFGHIYGNCPHCKEKISCPIE
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaggtgtaaccgtaattacgaggcaatctgggattggcatccggagatgata
ctcgtctcggaatcgcccgtcacctggaaaggctttctgatcgtctcgcattcgtcctac
gttgctggcgatgctcgttgttctagggtcaagttgaagctagctatgcccgattatccg
tccttcgacaatgcgcagatcgccttcggcaggcacattgctctcctgcggaacagagaa
ttcagcaggagggtgaaggacttgatgacgtccgcacaaactgtactgtcgttcttcacg
cagttacagtcactcgttagccagtatatgcttaacacagatagtaagagccgtatgatc
gacttcaagtctacgagagatttcctacaagatgtgagaacagcacttcagaatccatct
aatgtgcagttatcaagtgatcgggatctaaatactatcaagttatcattaagaggagtg
tctcttacgttgcaaagatgcaacgacgttggagctccctggaaagtagtctcttccgac
atgcctgctattcccacgttcgaaaagaatgtaactaatttgagcatcgcgatgacaaag
ttcaagtggcaagtggaattattggaaagagcgtgggaacaattaagagagattgatgag
aattgttgggtaattgatccaccggaaccgaacaaaagtcacatgtacagacgcattcat
ttgtcgcaatccttgtctgtgacgattacaatagatccgctgaatcccactgttttgcag
tcaattacattctcgggcagtgacaacgaggtgaagagacaaaaggaggaggttaacaat
aatctgaagaactggaatcgggactgtaatattctagaaaatctaagaattatgttaaat
acgtatgaatttcccgagcagcaggaaagtatggacgactcgaagggcattatcggcagt
cgtgaatgcggcatatgcttctccgaaaaatccgagaccgacgaattgccgcataagata
tgcaataacgagaggtgcatgaagcattttcattcagcatgtttatcaaggtggttacaa
atgaacgctgagaatcaagttgtgtttggccacatctatggcaattgcccgcattgtaag
gaaaagatttcctgtcctattgaatga
DBGET
integrated database retrieval system
